Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03288 ATGGGTGCATCAGGAAAATGGGTAAAGGCTTTAATCGGACTCAAGAAACCAGACAAAGACGAACATGTGAAAGAGGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGATGTGGGTTCTTGGAAGGCTTTCAAAGGAAACCACCACAAAGCAGCTTCTGAAGGGTCTGATTCTCCACCTGTTGTAGCACCAGATGCTTACACAGCCGCAGTAGCCACTGTGGTTCGAGCACCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAAGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAACAAGCTGCGGTGACACTGAGGTGTATGCAAGCCTTGGTTCGGGTTCAGGCCCGTGTTAGAGCTCGTCGTGTGAGGATGTCCATAGAGGGGCAAGCTGTGCAGAACATGCTTAATGAAAGGCGCAGTAAGCTTGAACTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACTTTGGAAGATGTTAAAACAAAGATACAGATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATTGCTTATTCTCTTGCTCAAAAGCAATGCAGATCAACCTCAAGTTATAATTCACGAACTAATGGCTCTGTTTCCTCTCTGAGGAGCCATGAGATTAACAAAGCTAACTGGGGGTGGACTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCTCAGGCAGAAGGTTTGTTAGATAAAACCCCACTTCCAAAGAAGTTTGAGGAATCCTATGTGAACTCTAATTCCAAACCATGTTTGGTCAAAGTCAAGAAGAACAACATGACAACAAGGGTTTCTGCTAGGCCTCCCCTTGTTGGGCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGTTCTGCATCATCTTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGATGACAGCAATGGTAATGCTGTGGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCTAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAGAGGGTACCGGTTTTCTCCAATGGAGATTCCAAAAGCACTGCAGGTTCTGACCCTTCAATCAACCTTTCTAGGCCACTTCACTTGGACAAGAGCTCGGTGAGGCCACGGTGA 1329 0.4658 MGASGKWVKALIGLKKPDKDEHVKEGGKSKKWRLWRSSSGDVGSWKAFKGNHHKAASEGSDSPPVVAPDAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRSKLELLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQCRSTSSYNSRTNGSVSSLRSHEINKANWGWTWLERWMAAKPWESRLMEQSQAEGLLDKTPLPKKFEESYVNSNSKPCLVKVKKNNMTTRVSARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYNRAQRQQSMDEFQFLKRVPVFSNGDSKSTAGSDPSINLSRPLHLDKSSVRPR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03288 442 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Viun9g03288 442 MobiDBLite consensus disorder prediction 411 442 - -
Viun9g03288 442 Pfam Protein of unknown function (DUF4005) 338 391 IPR025064 -
Viun9g03288 442 MobiDBLite consensus disorder prediction 310 370 - -
Viun9g03288 442 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Viun9g03288 442 MobiDBLite consensus disorder prediction 412 426 - -
Viun9g03288 442 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03288 Viun-Chr9 39719135 39721323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03288 1 442 IQD Protein Family AT2G26180 59.594 3.77e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03288 - - gmx:100799714 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00536 8 3873909 3876495 Viun9g03288 9 39719135 39721323 PCT