Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03273 ATGGAGGAGATGTCAACCACGGTTACAGTGCCACTGAGAGTAGGTAATTCAGTGTGTGATAAGCCAACCATTACTACTCACATGGATGTGTCCAGAATTAAGCTGATGACAGATGCAGGGTTGTTATCCAATTCTATAGCTAAGGTTTCTACCGATACTTTTATTGCTGATGAGGATCTTGACAGTGATTGTCTTGTGGAGGAAGTTGGTAGTGCAGCGGTCACACCACCAGAACAGGGAAGAGTAGAAGAAATTCCGATGTTGGGTATGGTGTCCCAGAATATAAACTCTTTGGTTGTCGGTGAAGAAGTTTTAACCCCAGAAATTGAGGATGATGATTTGATATCGCTGGAGGGTGATCCAATTATTGATAGTTCTCTTTCAGTAGTCAGCGAGAATAGTAGTTTTTGTGGAGATGAGTTCATCAGTTCTGAGGTTTCTGCAGATTTAGGGACAAGAAGTTCCATAGAAATCGAGAAAAGCATCACCACTGTGAAAATTGCTGCCAGGGCCACTGATTTGGGTGTGTCAAATGTAGTTGCAGATGTGGCAGTTAGCGTTGAAGAAGAGACTGGAGTTATATCTGGCCCAGAGCCTACTACTGGTGTTCTTCATCAACGAACTCTAGAAAGATCTGTGAGTGGAACAGTTGGTAGAAGTGTTTTTGAATTAGATTGTACCCCACTTTGGGGATTTACATCTGTGTGTGGAAAAAGACCTGAGATGGAAGATGCACTCGCAACTGTACCTAGATTTTTGAAAATTCCTATTCAAATGCTAACTGGTGATAGGGTACCTGATGGAATAGACCAATGTTTCAGGGAGCAGACAGTGCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGCGAGCGCATGCATTTAGCCTTGGCAGAGGAAATAGAATCTGTGAGAGAAGGTCTTTTAGTTGAAAGCACCAAGGATGATTGTCCAGATCTGTGGAAAAAAGCCTTCAGCAGTTGTTTTTTGAAGGTTGATTCTGAAGTTGGGGGTGATGTTAATTCTGATCCTGTTGCCCCAGAAACTGTTGGATCAACTGCTGTTGTTGCTGTTATATGTTCATCTCATATTGTAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTGTGTCGTGGCAAAGAACCCATGGCCCTATCAGTTGACCATAAACCAAATCGACCCGATGAATATGCAAGAATTGAGGCCGCCGGAGGCAGGGTGATACAATGGAATGGTCACCGAGTTTTTGGTGTTCTCGCAATGTCAAGGTCGATTGGTGATAGGTATCTGAAGCCATGGATTATTCCAGATCCTGAGGTGATGTTTCTTCCTCGTGCCAAAGACGATGACTGTCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACAAACGAAGAGGTGTGCGACATCGCTCGGCGGCGCATACTTCTCTGGCACAAGAAAAATGGCATGCCACTGTCCTCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTCTCAAACCGTGCCCTTCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTGGTGGACTTGAAAGCTCATAGAAAATTTAAGAGCAAGACGTGA 1632 0.4461 MEEMSTTVTVPLRVGNSVCDKPTITTHMDVSRIKLMTDAGLLSNSIAKVSTDTFIADEDLDSDCLVEEVGSAAVTPPEQGRVEEIPMLGMVSQNINSLVVGEEVLTPEIEDDDLISLEGDPIIDSSLSVVSENSSFCGDEFISSEVSADLGTRSSIEIEKSITTVKIAARATDLGVSNVVADVAVSVEEETGVISGPEPTTGVLHQRTLERSVSGTVGRSVFELDCTPLWGFTSVCGKRPEMEDALATVPRFLKIPIQMLTGDRVPDGIDQCFREQTVHFFGVYDGHGGSQVANYCRERMHLALAEEIESVREGLLVESTKDDCPDLWKKAFSSCFLKVDSEVGGDVNSDPVAPETVGSTAVVAVICSSHIVVSNCGDSRAVLCRGKEPMALSVDHKPNRPDEYARIEAAGGRVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFLPRAKDDDCLILASDGLWDVMTNEEVCDIARRRILLWHKKNGMPLSSERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAHRKFKSKT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03273 543 Gene3D - 216 543 IPR036457 -
Viun9g03273 543 CDD PP2Cc 231 533 IPR001932 -
Viun9g03273 543 Pfam Protein phosphatase 2C 259 526 IPR001932 -
Viun9g03273 543 ProSitePatterns PPM-type phosphatase domain signature. 280 288 IPR000222 GO:0043169
Viun9g03273 543 ProSiteProfiles PPM-type phosphatase domain profile. 229 533 IPR001932 -
Viun9g03273 543 PANTHER PROTEIN PHOSPHATASE 189 533 IPR015655 GO:0004722|GO:0006470
Viun9g03273 543 SMART PP2C_4 219 531 IPR001932 -
Viun9g03273 543 FunFam Protein phosphatase 2C 16 217 543 - -
Viun9g03273 543 SUPERFAMILY PP2C-like 225 534 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03273 Viun-Chr9 39618973 39623489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03273 1 543 PP2C-type Phosphatase Gene Family AT1G17550 48.381 4.59e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03273 K14497 - gmx:102662702 916.761