Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03267 ATGAGTGGTGATAATCCAAAACCACCACATTCACCAGAGAGTGATTTCAGCAAGCAATGGCCTTCGGAGCTCTCTCAGTACCTGAATTTTGATGATGATCAATGGTCATATGATGACCTGGATTCGTTTGTTTCAGGGCATGCTTTCAGCCATAAGACTGAAGCCATTGAAGTTGGTGAGGTTGGAGGAAGTAGCACCCACCATGAAGGGTCTTCTTCTATCAACGATGGTGATGAACATGAGAAGAATGAAGTGAAAGATAGAGTTGCATTCAAAACAAAGTCAGAGATAGAAATAATGGACGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCAAATCCAAGGAACTACTACAGGTGTTCAGTGGAGGGATGTTCGGTGAAGAAGGTAGTTGAAAGGGACAAGGATGATCCGAGGTATGTGATAACAACCTACGTAGGCACGCATACGCATCCGAGTTACAGTTAA 486 0.4403 MSGDNPKPPHSPESDFSKQWPSELSQYLNFDDDQWSYDDLDSFVSGHAFSHKTEAIEVGEVGGSSTHHEGSSSINDGDEHEKNEVKDRVAFKTKSEIEIMDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCSVKKVVERDKDDPRYVITTYVGTHTHPSYS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03267 161 Gene3D WRKY domain 87 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g03267 161 MobiDBLite consensus disorder prediction 72 89 - -
Viun9g03267 161 Pfam WRKY DNA -binding domain 101 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03267 161 SMART WRKY_cls 100 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03267 161 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 158 IPR044810 GO:0003700
Viun9g03267 161 MobiDBLite consensus disorder prediction 55 89 - -
Viun9g03267 161 ProSiteProfiles WRKY domain profile. 95 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03267 161 SUPERFAMILY WRKY DNA-binding domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g03267 161 FunFam WRKY transcription factor 57 86 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03267 Viun-Chr9 39570628 39571535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03267 33 159 WRKY Transcription Factor Family AT5G26170 52.448 4.52e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g03267 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03267 - - gmx:100819462 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03267 9 39570628 39571535 Viun9g03267 9 39570628 39571535 ECH