Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03266 ATGTGCGCCATAGTCCATTCTTTTCGTATCAATGGTGTCAAAATGAGTGGTGATAATCCAAAACCACCACATTCACCAGAGAGTGATTTCAGCAAGCAATGGCCTTCGGAGCTCTCTCAGTACCTGAATTTTGATGATGATCAATGGTCATATGATGACCTGGATTCGTTTGTTTCAGGGCATGCTTTCAGCCATAAGACTGAAGCCATTGAAGTTGACGATGGTGATGAACATGAGAAGAATGAAGTGAAAGATAGAGTTGCATTCAAAACAAAGTCAGAGATAGAAATAATGGACGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCAAATCCAAGGAACTACTACAGGTGTTCAGTGGAGGGATGTTCGGTGAAGAAGGTAGTTGAAAGGGACAAGGATGATCCGAGGTATGTGATAACAACCTACGTAGGCACGCATACGCATCCGAGTTACAGTTAA 480 0.4313 MCAIVHSFRINGVKMSGDNPKPPHSPESDFSKQWPSELSQYLNFDDDQWSYDDLDSFVSGHAFSHKTEAIEVDDGDEHEKNEVKDRVAFKTKSEIEIMDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCSVKKVVERDKDDPRYVITTYVGTHTHPSYS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03266 159 SMART WRKY_cls 98 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03266 159 Pfam WRKY DNA -binding domain 99 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03266 159 Gene3D WRKY domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g03266 159 FunFam WRKY transcription factor 57 84 158 - -
Viun9g03266 159 SUPERFAMILY WRKY DNA-binding domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g03266 159 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 156 IPR044810 GO:0003700
Viun9g03266 159 MobiDBLite consensus disorder prediction 12 33 - -
Viun9g03266 159 ProSiteProfiles WRKY domain profile. 93 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03266 Viun-Chr9 39570610 39571535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03266 26 157 WRKY Transcription Factor Family AT5G26170 49.664 8.87e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g03266 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03266 - - gmx:100808823 234.187