Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03263 ATGAGTTTGGGCACCGCCGAGGACGATTCGGGTTCTGAAATCCACATCCCAGCGGAGATTGATTGGCACATGTTGGATAAGTCCAAGTTTTTCTTCCTGGGCGCCGCCTTATTCTCCGGCGTTTCCTTCACGCTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCCTCCTCGCGCTTCTCATGCCTCAACATGTCCTGCGCCATTATGCGCTACGAGGGTCTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGAACCATCCCCGCGCGTGCGCTCTACATGGCGTCGCTTGAAGTCACCAAAAGTAACGTCGGGACCGCTTTGCTCAAATTGGGGTTCTCCGAGACCACGGCCGTGGCGGTGGCTAATGCCGCCGCGGGTGTTACTTCCGCCATGGCGGCGCAGCTGGTGTGGACCCCGGTTGATGTCGTGAGTCAACGGCTCATGGTTCAGGGGAGTGGAGGGAGTAAAACCATTCTGGCGAATCTCAATTCCGAGAGCTACAGGAACGGATTTGACGCGTTTAGGAAGATTCTGTGTGCTGATGGAGCAAGAGGGTTCTACAGAGGGTTTGGGATTTCGATATTGACTTATGCTCCTTCCAATGCCGTTTGGTGGACTTCTTATTCCATGGTTCACAGACTCATTTGGGGTGCTTTTGGTTCCTACATGAGTAAGGGTAAAGGTGAAAGCAATGATAATTTGAGTGGTTTTAGGCCTAATTCGAAGACAGTAGTGGCGGTTCAAGGGCTAAGTGCGGTTATGGCAAGTGGGGTCTCTGCAATTGTGACAATGCCTCTTGATACCATTAAGACAAGGTTGCAGGTGTTGGACAATGAAGAGCATGGGAGAAGAAGACCATTAACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGATTAGCCGCTTGTTACAGGGGTTTGGGGCCAAGATGGGCTTCCATGTCATTGTCTGCTACAACCATGATTACTACCTACGAGTTTTTGAAAAGAATGTCTACCAAGAGTCAATAG 1035 0.5111 MSLGTAEDDSGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSFTLYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTIPARALYMASLEVTKSNVGTALLKLGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSGGSKTILANLNSESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMSKGKGESNDNLSGFRPNSKTVVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDNEEHGRRRPLTFVQTVRNLVKEGGLAACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03263 344 Gene3D Mitochondrial carrier domain 22 164 IPR023395 -
Viun9g03263 344 Gene3D Mitochondrial carrier domain 165 344 IPR023395 -
Viun9g03263 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Viun9g03263 344 SUPERFAMILY Mitochondrial carrier 23 336 IPR023395 -
Viun9g03263 344 Pfam Mitochondrial carrier protein 252 343 IPR018108 -
Viun9g03263 344 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Viun9g03263 344 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Viun9g03263 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Viun9g03263 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Viun9g03263 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03263 Viun-Chr9 39551539 39553215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03263 1 344 Chloroplast and Mitochondria Gene Families AT1G72820 66.571 1.88e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03263 K15121 - gmx:100784202 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03263 9 39551539 39553215 Viun9g03263 9 39551539 39553215 ECH
Viun9g03263 9 39551539 39553215 Viun8g00585 8 4359743 4361502 ECH