Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03260 ATGGATAGCAATTGGGATAACTCCACCGACTCATTTCACAATCCACTCATCTATAACTATATCGAACCAGATCCCGCACTGGTCTATATAGTCAATGACCAACCCAACTTGGTGCCCCGACAACGAAATGTTCCTGTTGCTGTTGAACATGGCAGTTGGTCGACGAGGAAGCGTAAAATTCCTTTCACGGATCCAATGATTGAAGATCATCATCCCGTGTATGGCGATAATACTTTTCCCAACGGACAAAATGTGAGTGCAGACGTAAATTTAAACGAACTTCGATTTTGTCCTCCTGTACCAAAACCAATGTTCTGCACTTGCTGTCAAGTTCTTAGACAATTGATTTACACCAACGGTTCTGATTGTGAGACGTTCGAGATTCATGGAGAGATCGGGGTGATTAACCATGCAATAGTCCACTGCCAGAATTTCACACAGGATGGCCTTTCATGCGACGCTTATCGCAGGATTGATTTCTCCCACAATAGCACAGCAGAGATTAAGAGTTACCTGGTAGAATACTGCGCACAGAAGAATAAATTAGGATACATTGCTCTACAAGATCCGTTGTCTACTTATTACGAAGCCCTCTGCACTGGTCTGGAAACGGTTGGCGTTTTCATAGACGAAGACGAAAACACAATCCCACAAAATGAGGCCGAGCCCGAGTTGGAGCCGGAGCCCGAGCCCGAGCCCGAGCCCAAGCCTGAGAGTAAAAGAGCTTCTTCAGCTTTTAAACCCAATCGCCAATTTCAGATAAAGAGAATAAAAACGATGACACTGAATGATCTGAGGGGTGTGTTCCATTTAACCATTAAGGATGCTGCTGCAGAAATAGGCGTATCAGTATCTGTGATAAAAACAATTTGCCGCAGGGAAAGAATATCTTACTGGCCCCAAAGGAAGGTGACAAGCTTGGCGAAGAGAGTGGAAGTACTGAAGAAAAGTTTGGATTCACCGGATCCAGTGGTGAGGAAAACAACTCGAGAAGATATTCAAACTTTTCAACGATTAATAATTGAGTGCTGTGGTGGAGTCACCCCTACAGGAATACAACTGCTCCAGTTCCAAGAACAATAG 1083 0.4432 MDSNWDNSTDSFHNPLIYNYIEPDPALVYIVNDQPNLVPRQRNVPVAVEHGSWSTRKRKIPFTDPMIEDHHPVYGDNTFPNGQNVSADVNLNELRFCPPVPKPMFCTCCQVLRQLIYTNGSDCETFEIHGEIGVINHAIVHCQNFTQDGLSCDAYRRIDFSHNSTAEIKSYLVEYCAQKNKLGYIALQDPLSTYYEALCTGLETVGVFIDEDENTIPQNEAEPELEPEPEPEPEPKPESKRASSAFKPNRQFQIKRIKTMTLNDLRGVFHLTIKDAAAEIGVSVSVIKTICRRERISYWPQRKVTSLAKRVEVLKKSLDSPDPVVRKTTREDIQTFQRLIIECCGGVTPTGIQLLQFQEQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03260 360 ProSiteProfiles RWP-RK domain profile. 241 327 IPR003035 -
Viun9g03260 360 MobiDBLite consensus disorder prediction 219 246 - -
Viun9g03260 360 PANTHER PROTEIN RKD4 98 310 IPR044607 GO:0003700
Viun9g03260 360 Pfam RWP-RK domain 259 307 IPR003035 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03260 238 324 NLP Transcription Factor Family AT1G76350 36.667 1.93e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Viun9g03260 RWP-RK 4.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03260 - - vun:114163720 711.449