Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03256 ATGCTTCATCGCTCATTGCCTCCTCCTACACGGATCGACAACATGAATCTAAGTGAGAGCCCAACTACTCGCCACAACCTTTCTCGCCAATCATCGAAATCCAAAAGTGGTGGATGTTGTCGAGGCTTCAGCAGCGTCAGAACCGTGTCATCCACCGCACCAACCTTGCAACACCATCACCTTCAGCAGCTTTACCAAAAATTGGAACTAAAGGTGGCAGGTTTGGAAAAAGAGGTGCAGAGGCAGACAGAACTGCGCGTTATGTACAGGAAAAGAATGGAAAAGACGCAGGATTACTTGAAATACTGTCTCCAAATAGCACAGCAAAATGGAATCTTGGACCTCATTATCCACTCAAACGGTGAAGTCTCGCAATCTTCCATTTCTTCTCCACGTGCACTCAACTCCACTCTCACTCCTTCGCACAACCATCCCAACCTGATACCCATCGTTGATCAAGCCAAAATCAATGGATGGTTCATCAACCCCAGTGAGATCCAGCTGGGAGAAAAAATAGGGCAGGGAACCACGGCGGAGATTCACAGAGGGACGTGGCGCGGATTTGATGTGGCGGTGAAGTGCATGTCCGATTCATTCTTCAGCAAAAACGAAAACGGCGTCATATTCTTCGCTCAGGAGGTTGAAACCCTCTCGAAGCAGCGTCACCGGTTTGTGCTTGACCTCATGGGTGCGTGTCTGGACCCTCCGCATCATGCATGGGTGGTTACCGAGTATCTGAACACCACGCTCAAGGAGTGGCTACATGGGCCGGGGAAAAGGCCCAAACACAGAACCACCCCACTTCCTCCCTTGAAAGAGAGGGTGATGCGGGCCCTGGAAATAGCCCAAGGCATGCAGTACCTCCACGAACAAAAGCCCAAGGTCATTCATCGGGACTTGAAGCCCAGCAACATCTTCTTGGACGATGCGCTGCATGTGAGAGTTGCGGATTTTGGTCACGCGCGGTTCTTGGATGATGACGAAATGGCCCTCACCGGAGAAACAGGAACGTACGTGTACATGGCACCGGAGGTAATTCGGTGCGAGCCCTATGATGAAAAATGTGATGTATACAGTTTTGGGATCATACTCAACGAGTTACTCACCGGAAACTACCCTTATATTGAGACACAACTTGGTCCCGCCAAGATTGCTATGGAAGTTGTGGAGGATGAGCTAAGGCCTTTACTTGCATCAAAGGACGATGGTGAGGAAATGGAAGAACTGATTGACCTAATATGCCTTTGCTGGAATGCAAGCCCATCCACTCGACCATCCTTTGCAACAATTAGTCATACCCTCAAATCTTATGTTGAGAGCCTCCTTCAAATTTCAAATTAA 1341 0.4914 MLHRSLPPPTRIDNMNLSESPTTRHNLSRQSSKSKSGGCCRGFSSVRTVSSTAPTLQHHHLQQLYQKLELKVAGLEKEVQRQTELRVMYRKRMEKTQDYLKYCLQIAQQNGILDLIIHSNGEVSQSSISSPRALNSTLTPSHNHPNLIPIVDQAKINGWFINPSEIQLGEKIGQGTTAEIHRGTWRGFDVAVKCMSDSFFSKNENGVIFFAQEVETLSKQRHRFVLDLMGACLDPPHHAWVVTEYLNTTLKEWLHGPGKRPKHRTTPLPPLKERVMRALEIAQGMQYLHEQKPKVIHRDLKPSNIFLDDALHVRVADFGHARFLDDDEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGIILNELLTGNYPYIETQLGPAKIAMEVVEDELRPLLASKDDGEEMEELIDLICLCWNASPSTRPSFATISHTLKSYVESLLQISN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03256 446 Gene3D Transferase(Phosphotransferase) domain 1 247 443 - -
Viun9g03256 446 MobiDBLite consensus disorder prediction 11 40 - -
Viun9g03256 446 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03256 446 Coils Coil 58 85 - -
Viun9g03256 446 SUPERFAMILY Protein kinase-like (PK-like) 135 432 IPR011009 -
Viun9g03256 446 SMART serkin_6 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03256 446 Gene3D Phosphorylase Kinase; domain 1 154 246 - -
Viun9g03256 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Viun9g03256 446 CDD STKc_MAP3K-like 172 434 - -
Viun9g03256 446 Pfam Protein kinase domain 168 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03256 446 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 435 - -
Viun9g03256 446 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Viun9g03256 446 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03256 Viun-Chr9 39497901 39499957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03256 136 435 MAP Kinase Kinase Kinase AT5G11850 36.877 7.98e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Viun9g03256 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03256 - - vum:124826171 823.542