Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03237 ATGGCTACTTGTCTCTTCAGATTTCCTCTCACCTTGCAACCCAAGCTCTGCTTCAATTACACGCCCAACCATGCCGTTCAATTCATTTGTCCGACCAGACGACGTCGCAACCGCCACCGTCATGAGATTTTCCGTCCATCATTCGCAGTATCCAGCTCCTTCCGGACCGAGATTAGCTCACCGGAATCAGTTCTTATCGGAGTCCAGAGAGAGAAAAAAGACTCGCCAGTTCTGCTTGACGTCACCGGCATGATGTGCGGTGCGTGCGTCTCCCGAGTCAAAAGCATCCTGTCCGCTGACGAACGAGTCGACTCGGTCGTGGTCAACATGCTGACCGAGACCGCTGCCGTTAATCTGCGCCGGATCGAGGAGGAACCGGCGAGCGTCGCGGAGAGCCTCTCACGGAGACTGAGCGACTGCGGATTTCCGACGAAGCGGAGAGCGTCGAGTTCGGGAGTGACGGAAAACGTGAGGAAGTGGAAGGAATTGGTGAAGAAGAAGGAGGAATTGGTCGCTAAGAGTCGAAGCCGCGTCGCGTTCGCTTGGACATTGGTCGCATTGTGCTGCGGGTCGCACGCTTCGCATATCTTTCACTCTCTGGGGATCCACATTGGTCATGGATCGCTTTTGGACATTCTTCATAGTTCGTACGTGAAAGGTGGTTTAGCTTTGGGGGCTCTATTGGGACCAGGACGAGAATTACTCTTTGATGGCCTAAATGCGTTTAAGAAGGGGTCGCCTAACATGAACTCTCTCGTGGGATTTGGTTCTATAGCTGCATTCATCATTAGTTCCATCCCGTTACTTAACCCCGGCCTAGCATGGGATGCATCGTTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTGGGACGTTCTCTGGAGGAAAAGGCAAGGATCCAGGCATCTAGCGATATGAATGAACTGCTTTCACTTATATCTACTCAATCAAGACTTGTGATTACTTCAACAGAAGGTTCACCTTCTACTGACACTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGATTCTGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAAGGTTATTTCGGGAAGAAGTGTTGTAGATGAATCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGAAAGGCCTCACAGTTTCAGCAGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGTTCCAACACTGTGATATCGAAGATTGTACGCATGGTTGAGGAAGCTCAATCACGTGAAGCACCAGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATACAGTGTAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTGTTGGATCACAGATATTTCCTGATGTTTTGCTCAATGACATTGCGGGCCCAGAAGGAGATCCTTTGCTTTTGAGTTTAAAACTGTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCATTGGGTCTTGCTACGCCCACAGCAATCCTGGTTGGCACTTCACTTGGAGCAAGAAAAGGACTTCTTATTAGGGGAGGGGATGTGCTGGAACGCTTGGCCAGAATAAACTATATTGCTCTAGACAAGACAGGAACCCTGACAAGAGGAAAACCAGTTGTGTCGGCCATAGGCTCTATCCATTATGAAGAGTCTGAAATTCTTCGGATTGCTGCTGCAGTGGAGAAGACTGCATCTCACCCAATAGCAAAGGCTATTATCAATAAAGCTGAGTCATTGGAGTTGATCCTTCCTGTCACAAAGAGACAGTTAGTCGAACCAGGTTTTGGTACTTTAGCAGAAGTAGATGGCCATTTGATTGCTGTTGGGTCTTTGGAATGGGTTCATGAACGCTTCCAAACAATAGTAAATCCGTCTGATTTGACAAATCTGGAACATAGTTTGGTGAGTCATTCATCAAATACAACATCTTCTAAGTATTCGAAAAGCGTTGTCTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATAGCTGATACTGTGCGTGAAGATGCTGAATCTACTGTAATGAGGCTCAACCAGAAGGGGATTAAAACGGTCCTCTTGTCAGGAGACAGGGAAGAAGCAGTTGCAACAGTAGCAGATACAGTTGGAATTGAAAATGATTTTGTCAAAGCATCTTTGTCTCCACAACAGAAATCTAGGTTTATTTCCTCTCTAAAAGCTGCCGGACATCATGTTGCGATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCTATTATACTTCTAGGGAACAAAATTTCACAAGTTGTCGATGCGCTCGACCTAGCACAGGCAACAATGGCAAAAGTGTACCAAAATTTGTCTTGGGCGGTCGCCTATAATGTTGTTGCCATTCCCATTGCTGGCGGTGTTTTACTTCCCCAATTTGACTTCGCCATGACACCGTCACTTTCTGGAGGACTGATGGCTCTGAGCTCCATCTTCGTGGTTGGCAACTCATTGCTTCTACAGCTTCATGGGTCTCAGATCCCTAGAAAGGGCTAA 2643 0.4673 MATCLFRFPLTLQPKLCFNYTPNHAVQFICPTRRRRNRHRHEIFRPSFAVSSSFRTEISSPESVLIGVQREKKDSPVLLDVTGMMCGACVSRVKSILSADERVDSVVVNMLTETAAVNLRRIEEEPASVAESLSRRLSDCGFPTKRRASSSGVTENVRKWKELVKKKEELVAKSRSRVAFAWTLVALCCGSHASHIFHSLGIHIGHGSLLDILHSSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSIAAFIISSIPLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSTEGSPSTDTVLCSDAICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEKGLTVSAGTINWDGPLRIEASSTGSNTVISKIVRMVEEAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFVGSQIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLARINYIALDKTGTLTRGKPVVSAIGSIHYEESEILRIAAAVEKTASHPIAKAIINKAESLELILPVTKRQLVEPGFGTLAEVDGHLIAVGSLEWVHERFQTIVNPSDLTNLEHSLVSHSSNTTSSKYSKSVVYVGREGEGIIGAIAIADTVREDAESTVMRLNQKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSRFISSLKAAGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNVVAIPIAGGVLLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSQIPRKG 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03237 880 SFLD Haloacid Dehalogenase 528 811 - -
Viun9g03237 880 SUPERFAMILY HAD-like 543 866 IPR036412 -
Viun9g03237 880 Gene3D - 68 148 - -
Viun9g03237 880 Gene3D - 536 809 IPR023214 -
Viun9g03237 880 ProSiteProfiles Heavy-metal-associated domain profile. 75 145 IPR006121 GO:0046872
Viun9g03237 880 PANTHER ATP7, ISOFORM B 71 871 - -
Viun9g03237 880 Pfam Heavy-metal-associated domain 79 142 IPR006121 GO:0046872
Viun9g03237 880 PRINTS P-type cation-transporting ATPase superfamily signature 681 692 - -
Viun9g03237 880 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Viun9g03237 880 PRINTS P-type cation-transporting ATPase superfamily signature 545 559 - -
Viun9g03237 880 PRINTS P-type cation-transporting ATPase superfamily signature 758 777 - -
Viun9g03237 880 PRINTS P-type cation-transporting ATPase superfamily signature 703 713 - -
Viun9g03237 880 SUPERFAMILY HMA, heavy metal-associated domain 77 120 IPR036163 GO:0046872
Viun9g03237 880 Gene3D - 556 689 IPR023299 GO:0000166
Viun9g03237 880 Gene3D - 301 432 - -
Viun9g03237 880 SFLD p-type atpase 528 811 IPR044492 -
Viun9g03237 880 FunFam Copper-transporting ATPase 1, putative 301 432 - -
Viun9g03237 880 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 547 642 IPR023299 GO:0000166
Viun9g03237 880 CDD P-type_ATPase_HM 177 868 - -
Viun9g03237 880 FunFam Copper-transporting ATPase PAA2, chloroplastic 556 689 - -
Viun9g03237 880 Pfam haloacid dehalogenase-like hydrolase 541 772 - -
Viun9g03237 880 CDD HMA 79 143 IPR006121 GO:0046872
Viun9g03237 880 NCBIfam heavy metal translocating P-type ATPase 249 869 IPR027256 GO:0006812|GO:0016020|GO:0019829
Viun9g03237 880 SUPERFAMILY Calcium ATPase, transmembrane domain M 281 539 IPR023298 -
Viun9g03237 880 NCBIfam HAD-IC family P-type ATPase 330 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03237 880 SUPERFAMILY Calcium ATPase, transduction domain A 338 428 IPR008250 -
Viun9g03237 880 Pfam E1-E2 ATPase 331 525 - -
Viun9g03237 880 ProSitePatterns E1-E2 ATPases phosphorylation site. 547 553 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03237 Viun-Chr9 39410590 39418990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03237 240 879 Primary Pumps ATPases AT1G63440 36.098 7.02e-113 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03237 K17686 - gmx:100127402 1466.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03237 9 39410590 39418990 Viun9g03237 9 39410590 39418990 ECH