Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03235 ATGGCGTTTTGGTCTGGCCTCCTTCTTCTGCTTCTTTTCCTTTGTTTGGATTCGGTGAAATCTCACGACGGAGCAACGTTGTTGGAGATGAAGAAGTCGTTGAGGGATGTGGATAACGTTCTGTTTGACTGGAATGATACACCTTCTTCAGATTATTGTGCCTGGAGAGGGGTTACTTGTGATAATGTCACTTTCAATGTGGTTGCACTGAATCTTTCAGGATTGAATCTTGAAGGCGAGATTTCACCTGCAATAGGGAGGCTTAGCAGCTTGGTCTCCATTGATCTCAAGGAAAACCGTTTATCTGGGCAGATACCTGATGAGCTTGGTGACTGTTCCTCTTTGAATAACGTAGACTTCTCTTTTAATGAGATTCGGGGAGATATACCGTTTTCAATTTCGAAGATGAAACAACTGGAAAATCTAATCTTGAAAAATAATCAGCTCATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTGAAGATTCTAGACCTGGCGCAGAACAATCTCAGTGGGGATATACCAAGACTTATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGATAACAATTTGTCGGGTTCACTTTCTCCAGACATATGCCAGTTAACTGGATTGTGGTATTTTGACGTGAGAAACAATAGCTTGACAGGCAGCATTCCGGAAAGCATAGGCAATTGTACTGGTTTCGAGATCTTGGATTTATCTTACAACAAGCTATCTGGAGAGATACCATTCAATATTGGTTTCCTGCAAGTAGCTACTCTGTCATTGCAAGGCAATAAACTCTCAGGTTATATTCCACCAGTTATTGGTCTGATGCAAGCCCTTACTGTGTTAGATTTGAGCTGTAACATGCTAAGTGGGCCAATCCCTTCTATACTGGGAAATTTGACCTACACAGCAAAACTGTATTTGCATCGAAACAAGCTGACTGGTCTCATCCCCCCGGAGCTCGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTAAGTGGACAAATTCCGCCCGAGCTTGGAAAGCTTACTGATCTGTTTGACTTAAATGTTGCCAATAACAACCTTGAGGGTCCAATTCCCGAGAATCTCGGCTCGTGTAAAAACCTCAACAGCCTCAATGTGCATGGGAATAAGATGAGTGGAACAATTCCCTCATCTTTTCAAACCTTGGAGAGTATGACCTATCTGAATCTTTCTTCAAACAATTTTCAAGGGTCTATTCCAATTGAACTTTCACGGATTGGAAATTTGGATACACTGGATATATCAAATAATAATATAGTTGGTTCCATTCCTTCTTCCATTGGTGATTTGGAACATCTTCTGAAGTTGAATCTGAGCAGAAATCATTTAACAGGCTTTATTCCGGCAGAATTTGGTAATCTAAGAAGTGTCATGGATATTGACCTTTCAAATAATCAACTCTCTGGCTTGATCCCTCAAGAACTTAGTCAGCTTCAGAACATGATATCTTTGAGACTAGAAATGAACAAATTATCTGGGGATGTATCTTCGCTTGTAAATTGCCTTAGTCTTTCATTGATTAATGTATCTTACAACAATTTAGTTGGTGTTATTCCCACAAGCAACAACTTTTCCAGGTTTCCTCCTGATAGTTTTATTGGAAACCCTGGTCTCTGTGGCTATTGGCTGGATTCATCTTGTCAAGGGTCTCACCCTACCGAGCGAGTTAACTTGTCTAAGGCAGCTATCCTAGGAATTGCTCTAGGTGCCCTTGTGATTCTTTTCATGGTACTCTTTGCAGCTTGCCGACCACACAATCCAGCTCCTTTCCCTGAAGGATCTTTTGACAAACCAGTTAATTACTCACCTCCGAAGTTAGTGATTCTTCACATGAATATGGCACTTCATGTATATGATGATATAATGAGGATGACAGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCATCAAGTACAGTTTACAAATGTGTTCTTAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTCTATTCCCACTACCCCCAATGCTTGAAAGAGTTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAAGCACAGGAATCTGGTCAGTCTCCAAGGCTACTCTCTGTCTCCATTTGGAAACCTCCTCTTTTATGATTACATGGAAAATGGAAGTCTGTGGGATCTTCTACATGGACCTACCAAGAAGAAAAAACTTGATTGGAATGTTCGTCTAAAAATAGCACTTGGATCAGCACAAGGGCTCGCTTATCTACACCATGATTGCTGTCCACGTATCATTCACAGGGATGTGAAATCATCTAATATATTACTAGACAAAGACTTGGAGCCCCATCTCACCGATTTTGGCATTGCAAAGAGTCTATGTCCTTCTAAGTCCCACACTTCAACTTACATAATGGGCACAATTGGCTACATAGACCCCGAGTATGCAAGAACTTCTCGTCTCACTGAGAAGTCTGATGTGTATAGCTACGGTATTGTATTACTAGAGCTGCTAACTGGGAGGAAAGCTGTGGAAAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACAGCTAATGATGCTGTAATGGAAACCGTTGACCCAGATATCAGTGCCACATGCAAGGACATGGGAGCAGTGAAAAAGGTTTTTCAGCTTGCTCTTTTGTGCACCAAGAAGCAACCAGTGGATAGACCCACAATGCACGAGGTGACGCGCGTGCTGGGGAGTCTAGTGCCACCAAAAGACTCAGCCCCAATGCAAGTACTCTTACCTCATTCACAGCCATCTGCAAAAATGCAATCATACAAGGATGAATACGCCAATCTTAAAGCTCCACACTTGGTCAACTGTCCCTCCATCAGCACCTCTGATGCGCAACTCTTCCTCAAATTTGGAGAAGTAATATCTCAAAACAGCGAGTGA 2934 0.4165 MAFWSGLLLLLLFLCLDSVKSHDGATLLEMKKSLRDVDNVLFDWNDTPSSDYCAWRGVTCDNVTFNVVALNLSGLNLEGEISPAIGRLSSLVSIDLKENRLSGQIPDELGDCSSLNNVDFSFNEIRGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGDIPRLIYWNEVLQYLGLRDNNLSGSLSPDICQLTGLWYFDVRNNSLTGSIPESIGNCTGFEILDLSYNKLSGEIPFNIGFLQVATLSLQGNKLSGYIPPVIGLMQALTVLDLSCNMLSGPIPSILGNLTYTAKLYLHRNKLTGLIPPELGNMTKLHYLELNDNHLSGQIPPELGKLTDLFDLNVANNNLEGPIPENLGSCKNLNSLNVHGNKMSGTIPSSFQTLESMTYLNLSSNNFQGSIPIELSRIGNLDTLDISNNNIVGSIPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPQELSQLQNMISLRLEMNKLSGDVSSLVNCLSLSLINVSYNNLVGVIPTSNNFSRFPPDSFIGNPGLCGYWLDSSCQGSHPTERVNLSKAAILGIALGALVILFMVLFAACRPHNPAPFPEGSFDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPFGNLLFYDYMENGSLWDLLHGPTKKKKLDWNVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKDLEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVENESNLHHLILSKTANDAVMETVDPDISATCKDMGAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKDSAPMQVLLPHSQPSAKMQSYKDEYANLKAPHLVNCPSISTSDAQLFLKFGEVISQNSE 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03235 977 Gene3D Ribonuclease Inhibitor 300 567 IPR032675 -
Viun9g03235 977 SUPERFAMILY L domain-like 47 298 - -
Viun9g03235 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 721 921 - -
Viun9g03235 977 Gene3D Ribonuclease Inhibitor 182 298 IPR032675 -
Viun9g03235 977 SUPERFAMILY Protein kinase-like (PK-like) 622 911 IPR011009 -
Viun9g03235 977 Pfam Protein kinase domain 648 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03235 977 Gene3D Transferase(Phosphotransferase) domain 1 721 923 - -
Viun9g03235 977 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Viun9g03235 977 SMART LRR_typ_2 279 303 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 471 494 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 399 423 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 327 351 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 160 184 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 447 470 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 208 232 IPR003591 -
Viun9g03235 977 SMART LRR_typ_2 88 112 IPR003591 -
Viun9g03235 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Viun9g03235 977 SUPERFAMILY L domain-like 258 544 - -
Viun9g03235 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 616 720 - -
Viun9g03235 977 ProSiteProfiles Protein kinase domain profile. 645 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03235 977 Gene3D Ribonuclease Inhibitor 20 181 IPR032675 -
Viun9g03235 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 185 294 - -
Viun9g03235 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 184 - -
Viun9g03235 977 Gene3D Phosphorylase Kinase; domain 1 618 720 - -
Viun9g03235 977 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Viun9g03235 977 PANTHER LEUCINE RICH REPEAT KINASE 2 373 915 - -
Viun9g03235 977 SMART serkin_6 645 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03235 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 295 567 - -
Viun9g03235 977 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Viun9g03235 977 Pfam Leucine rich repeat 357 412 IPR001611 GO:0005515
Viun9g03235 977 Pfam Leucine rich repeat 425 484 IPR001611 GO:0005515
Viun9g03235 977 ProSitePatterns Protein kinases ATP-binding region signature. 651 674 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03235 Viun-Chr9 39395217 39402543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03235 90 976 Receptor kinase-like Gene Family AT5G07180 64.302 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Viun9g03235 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03235 K20718 - gmx:100804875 1736.85