Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03233 ATGCCTGAACCAATCATGAGTCTGCGCCATGGCACTAAGGTTTGGGTTCACGACAGGGATTTGGCGTGGATTCCAGCTGAAGTAGTCGAATCTTCAGGAAACAATGTTACCGTTGCCACTGCTTCTGGCAATAAGGTTATTGCTCTTTCGCAGAACGTGTTTCCCAGGGACGCGGACGAAGATGAGCATGGTGGAGTGGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGAGTGTTGTACAATCTCCGCAGGAGATATGCGCTAAATGATATCTATACTTATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATCTGTATGATATTCATATGATGGAGCAGTATAAGGGAACTCCATTTGGTGAGCTTAGTCCACATGTATATGCTGTTGCTGATGCTTCTTATAGAGCTATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTTAGTGGTGAAAGTGGTGCAGGGAAAACAGAGACTACAAAATTGATTATGCAATATCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGACAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTCTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTGCTAGAAAGATCACGAGTAGTACAGATAACAGATCCAGAACGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGTAGAGAAGTATAAGTTGGGACATCCACGTCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGCATAAACAGTGCTGAAGAGTACATGAAAACGAGAAGAGCAATGGATATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTGGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGTAAAGAGCATGACTCATCAGTACTAAAAGATGATAAATCAAGATTTCATTTGCAGATGGCTGCCAATCTTTTCAGGTGTGATTTGGACCTACTTCTTGCAACATTATGTACGCGTTCAATACAAACCCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGTTCCGTGGGCCAAGATATCAATTCCCAGATGCAAATAGGAGTTTTGGATATTTATGGTTTTGAATGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAGGAATACACCAAAGAAGAAATTAACTGGAGCTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGGGTCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCATGAAACATTCTCTACCAAGTTGTTTAAACACTTCCTGTCACACCCTAGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACCTACCATACAGAGACGTTCTTAGACAAAAATCGTGATTATGTAGTGTTAGAACATTGTAATCTATTATCCTCTTCAAAGTTGCCATTCGTGTCGGCTCTTTTTCCTTTGCTAACAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTGCAAGCACTCATGGAAACACTTAACACAACAGAACCTCATTACATTCGTTGTGTCAAGCCAAGTTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGTTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCCGAATTTATGGATGGAAGTTACGATGATAAAGCTGTAACTCTGAAAATATTGCAAAAGTTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCCGGTCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAATGCTGCAAAATGTATTCAGCGTCAACTGCGAATGTTTATTGCTCGCAGGGATTTCATCTCAATTCGTGCTGCTACACTTTCTCTTCAAGCATGCTGCAGAGGTTGCATTAGCCGAAAGATATATGCTTCTAAGCGGGAGACAGCAGCAGCTATTTCCATCCAAAAATACACCCGTATGTGTTTGATGAGACATGCTTATGTGAAATTGGGTTATTGTGCTATTATTGTACAATCCAATGTTCGTGGTTTCACAACCCGACAAAGGTTCTTGCATAGAAAGGAGCACAAAGCTGCCACTTACGTTCAGGCCTATTGGAGGATGTGCAAGGTTCGATCTGCATTCCTAAAACATCAAAATTCAATTGTAGCAATACAATGCCTTTGGCGATGCAGACAAGCAAAAAGAGAGCTTCGTAGACTTAAGCAAGAGGCTAATGAAGCTGGAGCCCTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAAAAAATTAGGGAGACTAAACTACCTCAGAGGCACTCATCCTTACATCTTTTTTGTGGTCACTGTGTATTTTTATGTCGCTTCTATGTGGGAAAGAAGAATGCTAAGCAGAACATGATTTCTAATGAAGAGGTTAAGCATGTTGAGATTTTCAAATTACAGCAGATGGTGGAGGCTCTGAATCTTGAATTAGATGCTGCTAAACTTGCAACAATTAATGAGTGCAACAGAAATGCAGTTTTGGAAAATCAGTTGCAGTTATCACTAAAGGAAAAATCTTCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCGAAAGGAAAATGCTCAATTAAAGGGTTCACTGGATGCTTTTGAAAAGAAGAGCATGGCTTTGGAGCTTGAGCTTGTTAGTGCTCGGAAAGACCAAGACAAAACCATTCAGAAAATGAGGGAGTTTGAAAACAAGTGTTCTCAACTTGGGCAAGATGTGAAAAGCCTCCAGGAAAAGCTATTTACTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCTTAACTGTATCTCCTAAGAGTAACCATCGAGGTTTAACAAAGTCATTTTCAGAAAAACACTCAAATGCAATAGCTCCCCGCACTGAGCAAAAGCCCATATTTGAATCGCCCACACCTACAAAACTTATTTCCCCTTTTACACATGGAAGTTTCTCAGACCCTCGTAGATCAAAACTAACGGCAGAGAGGCTCCAGGATAACAATGAACTCCTCTCTAGGTGTATTAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTTGTATCATATACAAATGTCTTCATCATTGGCATGCCTTTGAATCTGAGCGCACGGCCATATTTGATTACATTGTGGATGGAATTAATGATGTCCTAAAGGTTAGAGATGATGACACTGTCTTGCCATATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCAAATGGGTTTTTAACAGCCACGGCTCAACGTTACGCCAGATCATCTGGCTTGACCAGCCGAATAGGACATAAGCTGAGGTCTCCATTGAAGCTTATTGGATATGAAGATAGTACAGTACATGTGGAAGCAAGATATCCAGCTATTCTTTTTAAACAACAGCTTACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGGCATCATGTATTCAGGCACCTAAAACCGGTCGGATGCTAGGTGGAAAATCATCTAAATCTCCTGGTGGGCTTCCTCTGCAATCACCTGTTGCTCAATGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCAGAATGCGTGTAAATCATGTACCATCCTTTTTCATCCGCAAGCTAGTTACTCAGGTTTTTTCCTTCATCAACATTACACTCTTCAATAGCCTTCTGTTGCGACGTGAATGTTGTAATTTCTCAAATGGTGAATATGTAAAGTCTGGGCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCACGAACTGAACTATATAAGGCAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGAAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACAGTGAGGCAAATTTATCGAATCTGCACTATGTACTGGGACGACAAGTATGCAACCCAGAGTGTGTCCAACGAGGTAGTTAATCAAATGAGGGAAATTGTGAGCATGGACAATCAGAGTTTGACAACTAATTCTTTCTTGTTGGACGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACTGATGATATTGATCCCCCAGCATTTTTGTGCGAATATCCCTGTGCCCAGTTTCTTATTTTACATGAGAAATAA 4674 0.4001 MPEPIMSLRHGTKVWVHDRDLAWIPAEVVESSGNNVTVATASGNKVIALSQNVFPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGTPFGELSPHVYAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHPRHFHYLNQSKVYELDGINSAEEYMKTRRAMDIVGISHEDQEAIFCTLAAILHLGNIEFSPGKEHDSSVLKDDKSRFHLQMAANLFRCDLDLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPIGVIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTETFLDKNRDYVVLEHCNLLSSSKLPFVSALFPLLTEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPSSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRQLRMFIARRDFISIRAATLSLQACCRGCISRKIYASKRETAAAISIQKYTRMCLMRHAYVKLGYCAIIVQSNVRGFTTRQRFLHRKEHKAATYVQAYWRMCKVRSAFLKHQNSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRETKLPQRHSSLHLFCGHCVFLCRFYVGKKNAKQNMISNEEVKHVEIFKLQQMVEALNLELDAAKLATINECNRNAVLENQLQLSLKEKSSLERELVAMDEVRKENAQLKGSLDAFEKKSMALELELVSARKDQDKTIQKMREFENKCSQLGQDVKSLQEKLFTLEDENHVLRQKALTVSPKSNHRGLTKSFSEKHSNAIAPRTEQKPIFESPTPTKLISPFTHGSFSDPRRSKLTAERLQDNNELLSRCIKEDLGFKNGKPLAACIIYKCLHHWHAFESERTAIFDYIVDGINDVLKVRDDDTVLPYWLSNTSALLCLLQRNLHSNGFLTATAQRYARSSGLTSRIGHKLRSPLKLIGYEDSTVHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLASCIQAPKTGRMLGGKSSKSPGGLPLQSPVAQWDNIIKFLDSLMSRMRVNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCNFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRICTMYWDDKYATQSVSNEVVNQMREIVSMDNQSLTTNSFLLDDDMSIPFSAEDIDMAIPAINTDDIDPPAFLCEYPCAQFLILHEK 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03233 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Viun9g03233 1557 ProSiteProfiles Dilute domain profile. 1200 1500 IPR002710 -
Viun9g03233 1557 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Viun9g03233 1557 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Viun9g03233 1557 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Viun9g03233 1557 Pfam IQ calmodulin-binding motif 811 828 IPR000048 GO:0005515
Viun9g03233 1557 ProSiteProfiles IQ motif profile. 812 837 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 784 806 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 855 877 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 807 829 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 832 854 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 736 758 IPR000048 GO:0005515
Viun9g03233 1557 SMART iq_5 759 781 IPR000048 GO:0005515
Viun9g03233 1557 CDD MYSc_Myo11 78 722 IPR036018 -
Viun9g03233 1557 ProSiteProfiles IQ motif profile. 737 766 IPR000048 GO:0005515
Viun9g03233 1557 Coils Coil 1054 1088 - -
Viun9g03233 1557 Gene3D - 440 625 - -
Viun9g03233 1557 PANTHER MYOSIN 808 1489 - -
Viun9g03233 1557 Gene3D Kinesin motor domain 67 664 IPR036961 -
Viun9g03233 1557 Pfam DIL domain 1376 1479 IPR002710 -
Viun9g03233 1557 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 Coils Coil 988 1008 - -
Viun9g03233 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 783 IPR027417 -
Viun9g03233 1557 MobiDBLite consensus disorder prediction 1093 1112 - -
Viun9g03233 1557 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 FunFam Myosin heavy chain 254 308 - -
Viun9g03233 1557 Coils Coil 1012 1046 - -
Viun9g03233 1557 CDD MyosinXI_CBD 1151 1523 IPR037975 GO:0007015
Viun9g03233 1557 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Viun9g03233 1557 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 Gene3D - 736 786 - -
Viun9g03233 1557 Gene3D - 835 884 - -
Viun9g03233 1557 Gene3D - 787 834 - -
Viun9g03233 1557 Gene3D Myosin VI head, motor domain, U50 subdomain 313 603 - -
Viun9g03233 1557 SMART DIL_2 1375 1482 IPR002710 -
Viun9g03233 1557 MobiDBLite consensus disorder prediction 1093 1129 - -
Viun9g03233 1557 Gene3D - 669 735 - -
Viun9g03233 1557 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Viun9g03233 1557 Coils Coil 960 980 - -
Viun9g03233 1557 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun9g03233 1557 Coils Coil 869 913 - -
Viun9g03233 1557 Gene3D - 254 311 - -
Viun9g03233 1557 SMART MYSc_2a 58 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03233 Viun-Chr9 39368497 39393422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03233 6 1553 Myosins gene family AT4G33200 70.368 0.0 2219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03233 K10357 - gmx:100796413 2741.45