Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03224 ATGATGCACATGACCTTTTACTGGAGCCGGAAGGTCAATCTCCTGATCGATTCCTGGAAGACCCAGGATTGGACCGATTATCTCCTTACCCTTCTTGCATGTCTGGTCGTTTCCGCTTTCTACCAGTTCATTGAGAATCGCAGAATTCGCCTCAAGCTCATCGGTGCCGGAAAGCCCTTCCCGGCGGAGATCCAGACCCCTCTGTTGCAGCGGAAGCTCACCGGAAACGGCGCCAAGTTGGGGGTGAAGGTCGCCGGGGCGTTTCTCTTTGGGCTGAGCTCGGCCATCGGGTATTTGTTGATGTTGTCGGTTATGTCCTTCAACGGAGGGGTCTTCGTTGCCATTGTTGTGGGTCTCGCTGTTGGTTACTTTTTCTTCAGAAACGAGGGTGAAGATTCCATTATTGCTGACACTTCTTGCGCCTGTGCTTAA 432 0.5255 MMHMTFYWSRKVNLLIDSWKTQDWTDYLLTLLACLVVSAFYQFIENRRIRLKLIGAGKPFPAEIQTPLLQRKLTGNGAKLGVKVAGAFLFGLSSAIGYLLMLSVMSFNGGVFVAIVVGLAVGYFFFRNEGEDSIIADTSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03224 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Viun9g03224 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03224 Viun-Chr9 39341965 39342728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03224 1 143 Inorganic Solute Cotransporters AT5G20650 49.315 2.05e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03224 K14686 - gmx:100805457 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03224 9 39341965 39342728 Viun10g02392 10 38204846 38206375 ECH
Viun9g03224 9 39341965 39342728 Viun9g03224 9 39341965 39342728 ECH