Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03192 ATGGTCTGCGAGATGGAGAATGATTGCATAGAGGACATGGACATTGAGGCCCTTCCTTCAATGTGGCCTGAAGATATTGGAACTGATGTTGGAAAGCAGTTTATAGAAAAGCCTGGAAGGGACCAAGACATGTTAGAGGAGGTTACTATCATGGAGGAGCCAACTATAGTTGATTTCAAGCGACTCATGGAGCTTACAAATTTTACAGAAAAAGGGTCTTCTCAGTTGGCGTACCTAATGAAACACTGGGAGTACAAACAGGCCAATGTTGTGCGTCTTCTCAGAGAAGAACTCGACAACCTTAGCAAGCAAAGGCAGGATGTTGAGCTCAGGAAATTAGAGATATTGGAAGAGCATCGATTTGAGGAAGAAAGATATGGGGGTGATAAACGCCCAGTTTCTATTTTGGATGACGTTTATGATGGTATATGGCATGATATACCTTGCAGGAAAAGTGATGCTGTGGTTCAAAACAAGAAGAACGAGATTGATGCTGAGTATGACACCGTCATGTACTGGAAACAGCGAGCCTTGCAATTAGAGAAGCAGCTGGAGGCAAGTATCCAAAGGGAACAGATTCTTGAAGAAAAGCTGCAAGAAAGTATAGCAAACATTGAAAGGCAATCCTCACCTGTGGAAGAACTGTCCCAGATCCTGAAAAGAGCAGACAATTTCTTGCATTTTATACTGCAAAATGCACCTGTTGTTATTGGCCACCAGGACAAAGATTTGCGCTATTGCTTTATATACAATCATTTTCCAAGTTTACAAGAAGAGGACATCATAGGAAAAACGGATGTTGAAATATTCACGGGAGCTGGTGTTAAGGAATCTCAAGAGTTTAAGAGAGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTGTTTGGGTCAAAGACATTTTTGATATACGTAGAGCCCGTGTTTAGCAAAGCAGGGGAGACAATTGGAATAAATTACATGGGAATGGATATAACAGATCAGGTGAGAAAAAGGGAAAGGATGGCAAAGATTCGGGAAGAGATTGCTGTTCAGAAAGCCAAGGAAACAGAACTAAATAAAACCATTCACATTACAGAGGAAACAATGCGAGCAAAACAAATGCTGGCGACAATGTCTCACGAGATAAGATCTCCTTTGTCTGGGGTTGTTAGCATGGCTGAAGTTCTTTCTAACACAAAACTCGATTGGGAGCAAAGACAACTCTTGGATGTCATGCTATCTTCTGGAGATTTGGTTCTTCAACTTATAAATGACATCCTTGATCTTTCCAAGGTTGAGTCAGGAGTCATGAAATTGGAAGCTACTAAATTCCGGCCAAGAGAGGTAGTCAAACATGTACTCCAGACTGCTGCAGTTTCGTTGCAAAAAGTACTAACCTTGGAAGGACATGTAACTGATGATGTACCTATTGAGGTCGTTGGTGATGTTTTAAGGATGCGGCAAATTCTCACAAATTTAATCAGCAATGCCGTCAAGTTCACCCATGAAGGCAAAATTGGAATAAACCTTTACGTCGTGCCAGAACCTTCTTTTGCAAAGGCAGAATGCATGCAAAAGATGACTTCAGAGCATTCAACTATTTCAGTGAATGGTTTGAAAGAAGATAAATATCTATCAACGCCTCAAAGTGGCAGCAACAGAAAACCTCTTGGTGATGATTGTCCCAGCCAAAACCATGCATTCAATGATGAATGTAGATCACCGGTCAAAAGCGAATGCTCAATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGGAACAACAGTGTGGATACGTTGTGATGTATATGACACAGGCATTGGAATACCAGAAGATGCTATTCCAACCTTGTTTAAAAGGTACATGCAAGTCAGTGCAGATCATTCTCGAAAGTACGGTGGCACCGGGCTAGGATTAGCAATATGCAAACAGCTGGTTGAGTTGATGGGGGGTCGTTTAACCGTGTCTAGCAAAGAACATTACGGTTCTACCTTCACTTTCATACTCCCATACAAGGTTTCAAATGCTTGTGATAATTCTGATGACCAGGATGAGCTGTCTGATGTAGAGAACAATGATGCTGCATCTGATGATACAATAGAAAGTTTCTTCCAATTCCAGCCACGCACTTTGGGCTCTCTGTTCTCTTCTAATGGATGTAGCAGGACACAGATGTTATTACCAAACAAAATTGGCTACACAAGCTCCCATAAACTTGGTGGATTTTCTGACAGTTTATATGCAATCCTCTCTAATGATATCATGTCAAAAGAGACATGCTCAGTTGACGATTCATCTTCAGTTGTTGATGGTCCAGAAATGTCTGAATCGGCCAGTTCATCTGGTCACAGCTCAGAAGCAAAGAACAGAAGTTTAGTTAGCAGAGATAAACTGCAGCAAGATAAGGCTCATACCTGGTCCTTGAATGGTTATGCAGATTCCTCTGAAGCAACTGTAGCAAGTGGAGAAACGGCTGCAGCAACAAAGTCATGTGAATCCCAACAAACATGTCAGGGTCAGGGAAAGACAAGCACAACTATCCAATCAAGTAACTGTACACCAGGAGTAACCAAATCCTCATCAAGGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAATATCATGGTGACACAGTCCATGATGAAGCAATTAGGCCATAGCATACATGTTGTGAATAATGGCGTGGAAGCTGTACGTGCAGTTCAGCGCTGCTCTTTTGACTTGATTCTGATGGATGTCTGCATGCCAGTTATGAATGGTCTTCAAGCAACAAAACTGATTCGATCTTTTGAGGAAACAGGCAATTGGGATGCTGCAAGAAATGCTGGAATCGAGCTAAGTCTTTCAGATTCATATTATGAATGTTCTGAACCTTCTAGAAAGCGAATTCCTATTGTTGCTATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTATGCAAATGGAATGGACTCGTTTGTGTCAAAACCTGTAACTTTCCAGAAACTGAAAGAGTGTATTGAACAGTACCTGAGGTGA 3033 0.4148 MVCEMENDCIEDMDIEALPSMWPEDIGTDVGKQFIEKPGRDQDMLEEVTIMEEPTIVDFKRLMELTNFTEKGSSQLAYLMKHWEYKQANVVRLLREELDNLSKQRQDVELRKLEILEEHRFEEERYGGDKRPVSILDDVYDGIWHDIPCRKSDAVVQNKKNEIDAEYDTVMYWKQRALQLEKQLEASIQREQILEEKLQESIANIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKDLRYCFIYNHFPSLQEEDIIGKTDVEIFTGAGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDITDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEVLSNTKLDWEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAVSLQKVLTLEGHVTDDVPIEVVGDVLRMRQILTNLISNAVKFTHEGKIGINLYVVPEPSFAKAECMQKMTSEHSTISVNGLKEDKYLSTPQSGSNRKPLGDDCPSQNHAFNDECRSPVKSECSMNGDTEEQPYSAGTTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSADHSRKYGGTGLGLAICKQLVELMGGRLTVSSKEHYGSTFTFILPYKVSNACDNSDDQDELSDVENNDAASDDTIESFFQFQPRTLGSLFSSNGCSRTQMLLPNKIGYTSSHKLGGFSDSLYAILSNDIMSKETCSVDDSSSVVDGPEMSESASSSGHSSEAKNRSLVSRDKLQQDKAHTWSLNGYADSSEATVASGETAAATKSCESQQTCQGQGKTSTTIQSSNCTPGVTKSSSRPKILLVEDNKINIMVTQSMMKQLGHSIHVVNNGVEAVRAVQRCSFDLILMDVCMPVMNGLQATKLIRSFEETGNWDAARNAGIELSLSDSYYECSEPSRKRIPIVAMTANALSESAEECYANGMDSFVSKPVTFQKLKECIEQYLR 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03192 1010 Gene3D - 437 680 IPR036890 -
Viun9g03192 1010 CDD HATPase_EvgS-ArcB-TorS-like 487 672 - -
Viun9g03192 1010 Gene3D - 359 436 - -
Viun9g03192 1010 ProSiteProfiles Histidine kinase domain profile. 378 675 IPR005467 -
Viun9g03192 1010 FunFam Histidine kinase 5 213 348 - -
Viun9g03192 1010 Gene3D PAS domain 212 348 - -
Viun9g03192 1010 Gene3D - 858 1010 - -
Viun9g03192 1010 Coils Coil 177 208 - -
Viun9g03192 1010 SMART REC_2 865 1005 IPR001789 GO:0000160
Viun9g03192 1010 SUPERFAMILY CheY-like 863 1010 IPR011006 -
Viun9g03192 1010 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 45 1009 - -
Viun9g03192 1010 MobiDBLite consensus disorder prediction 836 860 - -
Viun9g03192 1010 SMART HKATPase_4 482 675 IPR003594 -
Viun9g03192 1010 FunFam Histidine kinase 5 859 1010 - -
Viun9g03192 1010 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 673 IPR003594 -
Viun9g03192 1010 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Viun9g03192 1010 CDD REC_hyHK_CKI1_RcsC-like 867 1005 - -
Viun9g03192 1010 FunFam Putative histidine kinase 5 359 436 - -
Viun9g03192 1010 CDD HisKA 370 432 IPR003661 GO:0000155|GO:0007165
Viun9g03192 1010 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 677 IPR036890 -
Viun9g03192 1010 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Viun9g03192 1010 ProSiteProfiles Response regulatory domain profile. 866 1009 IPR001789 GO:0000160
Viun9g03192 1010 Pfam Response regulator receiver domain 867 934 IPR001789 GO:0000160
Viun9g03192 1010 MobiDBLite consensus disorder prediction 764 801 - -
Viun9g03192 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 216 333 IPR035965 -
Viun9g03192 1010 Coils Coil 91 118 - -
Viun9g03192 1010 PRINTS Bacterial sensor protein C-terminal signature 635 653 IPR004358 GO:0016310|GO:0016772
Viun9g03192 1010 PRINTS Bacterial sensor protein C-terminal signature 600 614 IPR004358 GO:0016310|GO:0016772
Viun9g03192 1010 PRINTS Bacterial sensor protein C-terminal signature 659 672 IPR004358 GO:0016310|GO:0016772
Viun9g03192 1010 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Viun9g03192 1010 MobiDBLite consensus disorder prediction 541 569 - -
Viun9g03192 1010 MobiDBLite consensus disorder prediction 764 790 - -
Viun9g03192 1010 MobiDBLite consensus disorder prediction 541 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03192 Viun-Chr9 39151517 39157291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03192 1 1009 Histidine Kinase Gene Family AT5G10720 58.080 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g03192 HATPase_c 1.3e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03192 - - gmx:100819520 1705.26