Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03180 ATGAAGATTGCGGTGGAAGGGTGCATGCATGGCGACCTGGACAACGTTTACAGAACCCTTCAGCACTTGGAGAAATCCCAGAACACGAAAATCGACCTTCTCCTTTGCTGCGGTGATTTCCAAGCGGTTAGGAACGAGCAGGACTTGAAGAGCTTGAACGTCCCGCCCAAGTATCGCTCCATGAATTCCTTCTGGAAGTACTATTCCGGCGCCGAGGTTGCCCCTTACCCCACCATCTTCATCGGGGGGAACCACGAAGCGTCCAATTATCTCTGGGAACTGTACTATGGAGGATGGGTTGCTCCTAATATCTACTTCTTGGGTGCTGCTGGGGTGGTGAGGTTTGGGAATGTCCGAATTGGTGGTCTCTCTGGGATTTATAATGGTCGACACTATAAATTAGGACGATTTGAGAGGCCTCCCTATGATCAGAGTACCATTAGGTCTGTGTATCATGTTCGTGAGTATGATGTTCGTAAACTAATGGAACTTAAGGAGCCCATTGATATTTTTCTTTCGCATGATTGGCCACTGAGAATCACTGATTATGGGGATTGGGAGGAGCTTGTTCGGCGCAAGCACTATTTTAGGCAAGAGATAGAGGAAAAAAGATTAGGGAGTAAAGCAGCTGCTGAACTTCTAGAAAAACTGAAACCAAATTATTGGTTTTCGGCTCACTTACACTGCAAGTTTGCTGCTCTGGTTCAACATGGTGAAGGAGGTCCACTGACAAAATTCCTTGCACTGGACAAATGTATTGCGGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCGGATGCAGGACCCTATGAGATTCAGTATGATGAAGAATGGTTAGCGATAACACGGAAGTTCAACCCTATCTTCCCTTTAACCACCAAAGGTGCAGACTTCAGAGGTTTAAATCTCGAGATGGAAGATTGTCTTGAATGGGTTAGAAGCAGGCTGCGTGAGAAGGGGTGCAAACCATTTGAATTTGTTAGAACAGCTCCTTCCTATGACCCTTCACGGTCCAATTTTGATGGTGCTTTGACTGCGAATCTCCGAAACCCTCAGACAGAATCTTTTTTGCAGCTTCTGGAACTTCCATATCTTCTTGATAAAAATCCTGACGCAAAGGACTTTTCACCTTATCCTCCTCTTTCAGTTAAAAGTGGCATTAGTGATGATAATGAAGACATTCCCATTGATGATGTGGATGATGATGATGTAGAACTCCCAAAAGTTGATAATGTTGAAAGTTCTGCTATAGTGCGAATTGGTTCTGTCAAGGGATTTGCTGCTATTAATTGCATTAGTTCTTTATGTTACCTCTGCTATTGTACCATTATCAAGTGGAAGACTCTGCAAATTCAATGCATTGCCCCAGAAGTACTAAAAATTGGTTCTATGGAGACAAGAACAAGAACTCTTTCCGTAACAATCTCTTCTCTTTTTATGTTTTCTTTCGTTTGCTTTGTTAAGGGTAGCCTCTCTTTCAACTTCTATGCAGCTTCATGCCCTTCAGCTGAGTTAATCATAAGAGACACAGTTAGCTCATTTTCTTCTACTGATCCTTCGATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTTGTGGAGGGTTGTGATGCCTCTTTGATGCTGCAAGGGAACAACACAGAACAAAGTGATCCAGGAAATAGATCTGTTGGAGGATTTTCAGTGATAGATTCAGCAAAAACGGTCCTAGAGAAATTCTGCCCTGGAACTGTTTCTTGTGCGGACATAATAGCTATAGCTGCTAGAGATGCTGTTGCAATAGCTGGTGGACCTAGAATTATGATTCCTACAGGTAGGAGAGATGGGATGGTTTCACTTGCTTCAAATGTCAGACCCAACATTGTGGACACCAGTTTTTCAATGGATGAGATGCTTCAACTCTTTGCCACTAAAGGATTATCTTTACTTGATCTTGTAGTCCTTTCAGGAGCTCATACCATAGGCACAGCACATTGCAGCTCATTCAGGGATCGTTTTGAAGAAGATTCAATGGGAAAGCTGAGGCTCAGTGACAAAACCCTTGACAGTGACTATGCTGAAGTGCTGATGGAACAATGTCCAGCTGGTGTTCAACCTTCTGCAAAGGTGAACAATGATCCTCAAACATCTTTGCTCTTTGACAACATCTACTACCAGAATCTTCTGGCTCACAAGGGCCTGTTCCAATCAGATTCTGTTCTCATAAGCAATGATAGCACAAGGATGTTTGTGGAAGATTTTGCAAATGATCAAGACCTTTTCTTTCAGAATTGGGGTCAGTCCTTCTTGAAGCTCACCAGTGTTGGAGTCAAATCTGGTGATGTTGGTGAAATTAGATTATCTTGTGCATCAACTAATGCGTAA 2373 0.4311 MKIAVEGCMHGDLDNVYRTLQHLEKSQNTKIDLLLCCGDFQAVRNEQDLKSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWVAPNIYFLGAAGVVRFGNVRIGGLSGIYNGRHYKLGRFERPPYDQSTIRSVYHVREYDVRKLMELKEPIDIFLSHDWPLRITDYGDWEELVRRKHYFRQEIEEKRLGSKAAAELLEKLKPNYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCIAGRDFLQIVEIESDAGPYEIQYDEEWLAITRKFNPIFPLTTKGADFRGLNLEMEDCLEWVRSRLREKGCKPFEFVRTAPSYDPSRSNFDGALTANLRNPQTESFLQLLELPYLLDKNPDAKDFSPYPPLSVKSGISDDNEDIPIDDVDDDDVELPKVDNVESSAIVRIGSVKGFAAINCISSLCYLCYCTIIKWKTLQIQCIAPEVLKIGSMETRTRTLSVTISSLFMFSFVCFVKGSLSFNFYAASCPSAELIIRDTVSSFSSTDPSIPGKLLRMVFHDCFVEGCDASLMLQGNNTEQSDPGNRSVGGFSVIDSAKTVLEKFCPGTVSCADIIAIAARDAVAIAGGPRIMIPTGRRDGMVSLASNVRPNIVDTSFSMDEMLQLFATKGLSLLDLVVLSGAHTIGTAHCSSFRDRFEEDSMGKLRLSDKTLDSDYAEVLMEQCPAGVQPSAKVNNDPQTSLLFDNIYYQNLLAHKGLFQSDSVLISNDSTRMFVEDFANDQDLFFQNWGQSFLKLTSVGVKSGDVGEIRLSCASTNA 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03180 790 PRINTS Haem peroxidase superfamily signature 581 598 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Haem peroxidase superfamily signature 599 611 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Haem peroxidase superfamily signature 647 662 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Haem peroxidase superfamily signature 523 537 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Haem peroxidase superfamily signature 709 724 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 FunFam Peroxidase 625 768 - -
Viun9g03180 790 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Viun9g03180 790 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Viun9g03180 790 FunFam Lariat debranching enzyme 9 251 - -
Viun9g03180 790 SUPERFAMILY Heme-dependent peroxidases 492 789 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 Gene3D - 8 247 IPR029052 -
Viun9g03180 790 SUPERFAMILY Metallo-dependent phosphatases 1 240 IPR029052 -
Viun9g03180 790 Pfam Peroxidase 509 753 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 580 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 763 776 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 501 520 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 646 658 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 599 614 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 525 545 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 561 574 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 723 740 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 PRINTS Plant peroxidase signature 707 722 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 CDD MPP_Dbr1_N 3 259 IPR041816 -
Viun9g03180 790 Gene3D Peroxidase, domain 2 625 768 - -
Viun9g03180 790 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 402 - -
Viun9g03180 790 ProSitePatterns Peroxidases proximal heme-ligand signature. 647 657 IPR019793 -
Viun9g03180 790 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Viun9g03180 790 Gene3D - 495 789 - -
Viun9g03180 790 CDD secretory_peroxidase 492 785 IPR033905 GO:0004601|GO:0042744
Viun9g03180 790 ProSiteProfiles Plant heme peroxidase family profile. 491 789 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun9g03180 790 FunFam Peroxidase 495 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03180 Viun-Chr9 39080564 39089742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03180 465 789 Peroxidase AT4G31760 57.669 1.40e-134 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03180 K18328 - cave:132189503 1025.39