Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03168 ATGGCTGATTCTTCAAGAGCCGTCTCTGCTTCCCTTTTCTTCTTTTTCCTTCTCCTTGGATTCTCAGCAGCTAAGGAACTTTTAGTCGGAGGCAAGATTGATGCTTGGAAGATTCCATCTTCAGAAGCAGATTCTCTCAATCAATGGGCTGAAAAGTCTCGTTTCAGAGTTGGCGATTATCTGGTGTGGAAATTTCAAAGTGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAGGAATATGGTAATTGCAGCACCTCCAATCCCATCAAAGTGTACAGTGATGGGAATACTAAGGTGAAACTAGAGCGTCCTGGGCCATTCTATTTCATCAGTGGAGCAAAGGGGCACTGTGAGAAGGGGCAAAAGTTGATTGTGGTTGTGATGTCTCCAAAGCACACATTACGAGCGATTTCTCCGGCACCTTCTCCGGTGGAATTTGAGGCTCCGGCGGTTGCTCCAACTAGCAGTGCTGCAACGTTGGAAGTTGCTCTTGTAACCGTAACTCTCGGAGTGTTGGCTATGTATGTGTGA 531 0.467 MADSSRAVSASLFFFFLLLGFSAAKELLVGGKIDAWKIPSSEADSLNQWAEKSRFRVGDYLVWKFQSGKDSVLEVTREEYGNCSTSNPIKVYSDGNTKVKLERPGPFYFISGAKGHCEKGQKLIVVVMSPKHTLRAISPAPSPVEFEAPAVAPTSSAATLEVALVTVTLGVLAMYV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03168 176 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Viun9g03168 176 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Viun9g03168 176 FunFam Early nodulin-like protein 1 24 132 - -
Viun9g03168 176 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Viun9g03168 176 CDD OsENODL1_like 25 128 IPR041846 -
Viun9g03168 176 Gene3D - 23 132 IPR008972 -
Viun9g03168 176 PANTHER BLUE COPPER PROTEIN 26 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03168 Viun-Chr9 39042152 39043057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03168 11 172 Phytocyanin Superfamily AT2G25060 55.215 2.01e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03168 - - gmx:100305551 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03168 9 39042152 39043057 Viun9g03168 9 39042152 39043057 ECH
Viun8g00611 8 4661297 4662605 Viun9g03168 9 39042152 39043057 PCT