Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03159 ATGTCTCTTGATTCAGAACCAAATCTTTCTTCCATGGAACCAACTTCTGTCGACACTTCCCTCAACCTTAACGTTATTCCCTCTTCACACATACACCTCGCGGGAGAAGTTTTGGTTGAAGAGTTGCAGCGTCTGAACAGTGAGAACAAGATGCTAACCGAGACGCTGAAGCACGTATGCGAGAGCTATGTTGCTTTGCAGAAACATTTGAGTGAGTTCAACAGACTGAAGAACGCAAATTTTGAGAGAGAAGAAACAGCATCGCTGAAAAGAAAGGTGGAGAGTGAGAATTGCTCGAATCTGTTTTGCGTGAACGCGCATACAGAGTGCAGCAGTGAGGAAGAGACATTCAAAAAGCCTAAGCAAAGTAGCACCACCCCAAAGGTTCAAAAAGTTTTTGTACGGACCGATGCATCTGATACCAGCTTGTATGTGAGGGACGGATATCAGTGGAGAAAATATGGTCAAAAAGTGACGAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCCTATGCTCCAGGGTGCCCAGTGAAGAAGAAGGTGCAGAGAAGCGTGGAGGATCGAAGAGTGTTGGTAACAACGTACGAGGGAGAACACAACCATGGGGAAGAACATCAAACGGAGATAACGGCGAATTCAGGGAAAAGTGAAAGTGGGAGTGGTGGTCGAATTGAAGCGCTAGAATTGGTCCAGTCAAAAGTTGTTGACATGAATGCGCAAAAGTCATTGATGCAGCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACCAGAGATCCTAATTTCACTGCAGCACTTGCTTCTGCCATCTCTGGAAGAATTCTAGATCACACTTCTACGCCAAAACGTTGA 858 0.4499 MSLDSEPNLSSMEPTSVDTSLNLNVIPSSHIHLAGEVLVEELQRLNSENKMLTETLKHVCESYVALQKHLSEFNRLKNANFEREETASLKRKVESENCSNLFCVNAHTECSSEEETFKKPKQSSTTPKVQKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPGCPVKKKVQRSVEDRRVLVTTYEGEHNHGEEHQTEITANSGKSESGSGGRIEALELVQSKVVDMNAQKSLMQQFLVQQMATSLTRDPNFTAALASAISGRILDHTSTPKR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03159 285 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03159 285 MobiDBLite consensus disorder prediction 199 222 - -
Viun9g03159 285 Pfam WRKY DNA -binding domain 147 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03159 285 Gene3D WRKY domain 127 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g03159 285 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g03159 285 FunFam WRKY transcription factor 40 130 207 - -
Viun9g03159 285 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 276 IPR044810 GO:0003700
Viun9g03159 285 SUPERFAMILY WRKY DNA-binding domain 142 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03159 Viun-Chr9 38986055 38987407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03159 17 284 WRKY Transcription Factor Family AT1G80840 42.282 7.74e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g03159 WRKY 8.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03159 - - gmx:100127373 396.356