Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun9g03141 | ATGAGTAGTTTGGTGGAGAGGCTACGCGTAAGATCAGATCGCAGGCCAATTTATAATCTTGACGAGTCAGATGACGATGCTGATTTTTTGCCAAGAAAATCCGGGACAACACAGGAAAAGTTGGAGAGAATAGTGAGAACTGATGCGAAAGAGGATTTATGTCAAGCCTGCGGTGAAAATGAAAATCTTGTGAGTTGTGAAACTTGCACTTATGCTTACCATCCTAGGTGTTTACTTCCACCCCTTAAAGGACCCCTTCCAGACAACTGGAGATGCCCTGAATGTGTTAGCCCACTTAATGATATTGACAAGATATTAGATTGTGAGATGCGACCTACTACTGCTGCTGACAATGATGCCACAAAATTAGGGTCAAAACAAATTTTTGTTAAACAATACCTTGTTAAGTGGAAAGGCCTATCATATCTGCACTGCACATGGGTGCCGGAGAAAGAGTTTTTGAAGGCATTTAAGACTCATCCTCGTCTAAAGACAAAGGTGAACAACTTCCATCAGAAAATGGCATCTATCAATACTTCTGATGATGACTTTGTTGCCATTCGACCTGAATGGACTACAGTTGACCGGATACTTTCTTGCAGGGGTGATGATGATGAGAGAGAATACCTTGTGAAGTGGAAGGAACTTCCATATGATGAGTGTTATTGGGAGTTTGAGTCAGATATTTCTGCATTTCAGCCAGAAATAGAAAGATTCAATAGATTTCGGTCTAGATCCAGTAAATTTTCTTCTAGTAAACATAAACAGAGTGTTAAAGATGATACTGAATTGAAGAAACAGCAGAAAGAATTTCAACATTATGAACACAGCCCTGAGTTTCTCTCAGGTGGTACATTGCACCCATATCAGCTTGAAGGCTTGAACTTCTTACGATTCTCTTGGTCCAAGCAGACTCATGTTATACTTGCTGATGAAATGGGGCTTGGAAAAACCATACAAAGTATTGCTTTCCTGGCATCCCTTTTTGAAGAGGGTGTCTACCCACATCTGGTGGTTGCTCCACTTTCAACTCTGCGAAATTGGGAACGTGAATTCGCAACATGGGCACCTCATATGAATGTGCTAATGTATGTTGGATCTGCCCAAGCTCGTAGTGTAATAAGAGAGTATGAATTTTACTTTCCAAAGAAACAAAAGAAGATCAAGAAAAAGAAATCTGGTCAGCTAATTAGTGAAAACAAGCAAGAGAGGATTAAGTTTGATGTTCTTTTGACATCGTATGAGATGATCAACTTTGACACAACATCACTCAAACCTATAAAATGGGAGTGCATGATAGTCGATGAAGGTCACCGTCTGAAAAATAAGGATTCTAAATTATTTTCCTCACTGAAGCAATATTCTAGCAGGCATCGTGTTCTCTTGACCGGAACTCCTCTTCAGAACAACTTGGATGAGCTTTTTATGCTTATGCATTTCCTTGACGCTGGGAAGTTTGGAAGTTTAGAGGAGTTCCAGGAAGAGTTTAGGGATATCAATCAAGAGGAGCAGATTTCAAGGCTTCATAAAATGTTGGCTCCACATCTCTTGCGAAGAGTGAAGAAAGATGTCATGAAGGAATTACCTCCTAAAAAGGAACTTATTCTACGTATTGAGTTGAGCAGCAAACAGAAAGAATATTATAAGGCAATTTTGACCCGTAATTATCAGATATTAACTCGTCGTGGTGGTGCTCAGATTTCTCTTATCAATGTTGTTATGGAATTGCGGAAGCTTTGTTGTCATCCTTACATGTTAGAAGGAGTGGAACCAGATATTGATGATGCAAAAGAAGCATACAAACAGCTATTGGAATCGTCAGGGAAGCTGCAATTGCTGGACAAGATGATGGTCAAACTTAAAGAGCAAGGACATAGAGTCCTTATATATTCCCAATTTCAGCACATGCTGGACTTGCTTGAAGATTACTGTACTTACAAGAATTGGCAGTATGAGAGGATTGATGGCAAGGTTGGTGGAGCTGAAAGACAAGTTCGGATAGATCGATTTAATGCCAAAAATTCTTCAAGATTTTGCTTTCTTCTTTCTACTAGAGCTGGGGGATTGGGGATAAACCTTGCAACTGCTGACACGGTTATTATATATGATAGTGATTGGAATCCTCATGCTGATTTACAAGCTATGGCTAGAGCTCACAGACTCGGACAAACTAACAAGGTGTTAATTTATAGGCTTATAACACGAGGAACTATTGAAGAGAGGATGATGCAGATGACCAAGAAGAAAATGGTTTTAGAACACCTAGTTGTGGGGAGGCTAAAGGCTCAAAATATCAACCAGGAAGAATTGGATGACATTATAAGATATGGATCAAAGGAGTTATTTGCAGATGAGAATGACGAAGCTGGCAAATCCCGCCAAATCCATTATGATGCTGCTGCTATTGATAGATTGCTGGATCGTGATCAAGTTGGAGATGAAGAGGCCACTTTGGATGATGAGGAAGAAGATGGATTTCTGAAAGCTTTTAAGGTTGCAAATTTTGAGTATGTTGATGAGGCTGAAGCTGCAGCAGAGGAGGCTGCCGCCCAAAAAAGAGCATTAGAGAATGTAAACAGTTCGGAGAGAACACATTACTGGGAGGAGTTGTTAAGAGACAAGTATCAAGAGCATAAAGTTGAGGAGTTTAATGCCTTGGGAAAAGGGAAGCGTAATCGGAAGCTGATGGTTTCTGTGGAGGAGGATGACCTTGCTGGTCTGGAAGATGTTAGCTCTGATGGTGAAGATGATAATTATGAAGCAGAACTTACTGATGGGGATTCAAATTCCACTGGGACTGGAACTACTACTGCTAGAAGGCCTTATAAGAAAAAAGCTCGCAGTATGTGTCATTTTTTAAGTTTTTGTTTTGATATGATGGGCCTAGATTATCTGTTTGTGATGTTAATATTTAATTTATTAACAGCAGATAGCACAGAGCCTCTTCCTCTGATGGAAGGTGAAGGAAAAGCATTCAGAGTCCTTGGTTTTAATCAAAATCAGAGGGCTGCATTTGTTCAAATTTTGATGAGGTTTGGGGTTGGTGATTTTGATTGGAAGGAGTTTACTTCCCGCATGAAACAGAAGACTTACGAAGAAATTAAAGATTATGGAACCCTTTTCTTGTCTCATATCTCTGAAGATATAACCGAGTCCTCTACATTCACAGATGGTGTACCAAAAGATGGACTACGAATCCAAGATGTACTTGTAAGGATTGCAGTCCTGCTCTTGATAAGGGACAAGGTGAAGTTTGCGTCACAACATCCTCAAACTCCATTGTTTTCAGATGACATCTTATTACGCTATCCAGGTTTGAAGGGAGCGAAGATATGGAAGGAGGAGCATGATTTGGTTTTGTTGCGTTCTGTTTTAAAGCATGGTTATGGAAGGTGGCAAGCTATTGTTGATGACAAGGATCTGAAAATTCAGGAGGTCATCTGTCAGGAGTTGAATCTTCCCTTTATAAACTTACCAGTTCCAGGACAAGTTGGTTCTCAGCCACAAAATGGTGCAAATTTGACAAATGCCGAAGTACCCAACAATCAATCTAGAGAAAATGGTGGAAGTGATATACCAGCCGATGGTGCGCAGGGTTCTGGTGATGCCAGGAATCAAGCACAATTATATCAAGACTCCTCCATATTATATCATTTTAGAGACATGCAGAGAAGACAGGTTGAGTTTATAAAAAAGAGGGTTCTTCTTTTGGAAAAAGGGCTTAATGCTGAGTACCAGAAAGAGTACTTTGGCGATCCAAAATCAAATGACGAACTTAAAAGTGAACCCAAGGCTCCTAAATTAGTGGAAACTGACACCCAAATGATTGATCAACTACCGCAAGTAGAAACTATAGCTACAGAAGAAATTTCGGCTGCTTGTGATAGTGATCCTAATCGATTGGAGTTAGTTCGTCTTTACAATGAGATGTGCAAGATAGTCGAGGAAAACCCCATGGATGTGCAAGTTCAAACTTCTTTGGCAAGAGAACCAGCAGAGCTTCATGTAGGGAAGAATTTCTCACCACTAGAAACCATTTGCAAAGACATCAACAGAATTCTAACACCCACAGAAGAACAATCTGCTGCGGATATTCCAATGTCAAATTCAGAGAACAAATCAGAGGTTATGTCGCAGAGCGAGATTTTGGGCGCCAAATCACTGCCAACCCCTCAAGACTCCGCAAACAATGAGAGTAAAGATATGATAATAGAATCTGAACCTATAAAAGAAAGCTGCTCAAGCCTGGTAAAAGATACGAATGAAATACAGACTCTTCCGGACAAAGAGAAAAGTAATACTATAATGGATGAAACTATGACTGATGCTCAGTAG | 4335 | 0.4012 | MSSLVERLRVRSDRRPIYNLDESDDDADFLPRKSGTTQEKLERIVRTDAKEDLCQACGENENLVSCETCTYAYHPRCLLPPLKGPLPDNWRCPECVSPLNDIDKILDCEMRPTTAADNDATKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMASINTSDDDFVAIRPEWTTVDRILSCRGDDDEREYLVKWKELPYDECYWEFESDISAFQPEIERFNRFRSRSSKFSSSKHKQSVKDDTELKKQQKEFQHYEHSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEEGVYPHLVVAPLSTLRNWEREFATWAPHMNVLMYVGSAQARSVIREYEFYFPKKQKKIKKKKSGQLISENKQERIKFDVLLTSYEMINFDTTSLKPIKWECMIVDEGHRLKNKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFRDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIDDAKEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKNWQYERIDGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKELFADENDEAGKSRQIHYDAAAIDRLLDRDQVGDEEATLDDEEEDGFLKAFKVANFEYVDEAEAAAEEAAAQKRALENVNSSERTHYWEELLRDKYQEHKVEEFNALGKGKRNRKLMVSVEEDDLAGLEDVSSDGEDDNYEAELTDGDSNSTGTGTTTARRPYKKKARSMCHFLSFCFDMMGLDYLFVMLIFNLLTADSTEPLPLMEGEGKAFRVLGFNQNQRAAFVQILMRFGVGDFDWKEFTSRMKQKTYEEIKDYGTLFLSHISEDITESSTFTDGVPKDGLRIQDVLVRIAVLLLIRDKVKFASQHPQTPLFSDDILLRYPGLKGAKIWKEEHDLVLLRSVLKHGYGRWQAIVDDKDLKIQEVICQELNLPFINLPVPGQVGSQPQNGANLTNAEVPNNQSRENGGSDIPADGAQGSGDARNQAQLYQDSSILYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFGDPKSNDELKSEPKAPKLVETDTQMIDQLPQVETIATEEISAACDSDPNRLELVRLYNEMCKIVEENPMDVQVQTSLAREPAELHVGKNFSPLETICKDINRILTPTEEQSAADIPMSNSENKSEVMSQSEILGAKSLPTPQDSANNESKDMIIESEPIKESCSSLVKDTNEIQTLPDKEKSNTIMDETMTDAQ | 1444 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun9g03141 | 1444 | Pfam | Chromo (CHRromatin Organisation MOdifier) domain | 102 | 157 | IPR023780 | - | |
| Viun9g03141 | 1444 | Pfam | Chromo (CHRromatin Organisation MOdifier) domain | 193 | 241 | IPR023780 | - | |
| Viun9g03141 | 1444 | MobiDBLite | consensus disorder prediction | 1164 | 1203 | - | - | |
| Viun9g03141 | 1444 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 298 | 484 | IPR014001 | - | |
| Viun9g03141 | 1444 | Pfam | SNF2-related domain | 306 | 586 | IPR000330 | GO:0005524|GO:0140658 | |
| Viun9g03141 | 1444 | CDD | CD2_tandem | 190 | 239 | - | - | |
| Viun9g03141 | 1444 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 97 | IPR013083 | - | |
| Viun9g03141 | 1444 | Gene3D | - | 98 | 188 | - | - | |
| Viun9g03141 | 1444 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 612 | 773 | IPR001650 | - | |
| Viun9g03141 | 1444 | SMART | DUF1087_2 | 839 | 906 | IPR009463 | - |
Showing 1 to 10 of 42 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun9g03141 | K11643 | - | gmx:100790230 | 2528.05 |
Showing 1 to 1 of 1 entries