Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03131 ATGAAAATGAACCTTCTTTTTGTCGTTATTCTTCTTCTGCACTACGTTGCTGCTGCGGACCCTCCTGCTTCCTCTCCTCAATTTCCACCTGATTTCTCTCCAGGGGCGGAGCAGCATCACCTGCACAAGAAAATGCTGGTAGCTATTGTAGCAGCCACCACTTCACTTGCTGCACTCGTTTTCGGTTTCTTATGTTTCTGGATTTATCACACTAGGTGTCCAATAAAATCCAAAACCAAAAGGGTTAAAACTCCTGGTCCAGAGAGGGGGATCACCCTAGCACCGTTTCTGAGTAGATTCAGTTCCATCAAAATTGTTGGTATGAAGGAGTCTGTGCCGATAGTTGATTATAAGCAAATAGAAAAAACGACCAATAATTTTCTGGAAAGTAACATCTTGGGCGAGGGTGGTTTTGGATGTGTTTACAAGGCTCGGTTGGATCATAACCTGGATGTTGCGGTAAAAAAACTACACTGTGAAACTCAAAATGCGGAAAGAGAATTCGAGAACGAGGTGAAATTGTTAAGCAAAATTCAGCATCCGAATATAATCTCCTTACTGGGTTGTAGCATTGATGGTGACACGAGGTTTATCGTTTATGAGTTGATGCGAAATGGATCATTGGAAGCTCATTTACATGGACCTACTCATGGCTCGGCATTGACATGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGACTAGAATATCTGCATGAACACTGCTACCCTGCAGTGATCCACAGAGACATGAAATCTTCCAATATTCTCTTAGATGCAAACTTCAATGCCAAGCTGTCTGATTTTGGTCTAGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCTTAGGATACGTAGCACCGGAGTATCTTCTAGACGGTAAATTGAGTGATAAAAGTGATGTGTATGCTTTTGGGGTTGTGCTATTAGAGCTTCTACTAGGAAGGAAGCCTGTGGAAAAACTGGCACCGACGCAATGCCAGTCTATAGTCACATGGGCCATGCCACAGCTCACAGACAGAGCCAAGCTTCCAAACATTGTGGATCCAGTGATTAAGGACACAATGGATCATAAACACTTATACCAGGTTGCTGCTGTAGCTGTGCTATGCGTGCAACCAGAACCTAGTTATCGCCCTCTCATCACAGATGTTCTTCACTCACTTATCCCTCTTGTTCCCATTGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGAGGCAGCATGCCTCTCTTGCTGTGAATTCTCGTCATTGA 1281 0.4395 MKMNLLFVVILLLHYVAAADPPASSPQFPPDFSPGAEQHHLHKKMLVAIVAATTSLAALVFGFLCFWIYHTRCPIKSKTKRVKTPGPERGITLAPFLSRFSSIKIVGMKESVPIVDYKQIEKTTNNFLESNILGEGGFGCVYKARLDHNLDVAVKKLHCETQNAEREFENEVKLLSKIQHPNIISLLGCSIDGDTRFIVYELMRNGSLEAHLHGPTHGSALTWHMRMKIALDTARGLEYLHEHCYPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRKPVEKLAPTQCQSIVTWAMPQLTDRAKLPNIVDPVIKDTMDHKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQVRQHASLAVNSRH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03131 426 ProSiteProfiles Protein kinase domain profile. 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03131 426 Pfam Protein kinase domain 130 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03131 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Viun9g03131 426 PANTHER OS01G0750732 PROTEIN 38 401 - -
Viun9g03131 426 FunFam Protein kinase superfamily protein 94 202 - -
Viun9g03131 426 Gene3D Phosphorylase Kinase; domain 1 95 202 - -
Viun9g03131 426 FunFam probable receptor-like protein kinase At1g80640 203 402 - -
Viun9g03131 426 Gene3D Transferase(Phosphotransferase) domain 1 203 402 - -
Viun9g03131 426 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Viun9g03131 426 SUPERFAMILY Protein kinase-like (PK-like) 105 397 IPR011009 -
Viun9g03131 426 SMART serkin_6 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03131 426 CDD STKc_IRAK 133 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03131 Viun-Chr9 38755649 38759582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03131 109 401 Receptor kinase-like Gene Family AT3G58690 48.161 5.69e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Viun9g03131 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03131 - - gmx:100784795 701.049