Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03099 ATGTTTGCTGAAGAGAATGGCCTTAAGGGAGACCCCAGACTTCAAGCCATTTCTCAAGCCATCAGAGTCGTCCCTCACTTCCCCAAGCATGGAATAATGTTCCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGATACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGAGGATTCATGTTTGGTCCTTCAATTGCGTTGGGCATTGGAGCAAAGTTTGTCCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGCTCTAGAATATGGGACAGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCAGGTGAACGGGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTGAAGTAGTGGAATGTGCTTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGACTCATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTAAAGCAGATAAATGTTATTAA 576 0.4601 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRLIGKPLYVLVEPRKADKCY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03099 191 CDD PRTases_typeI 51 183 IPR000836 -
Viun9g03099 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Viun9g03099 191 Gene3D - 6 184 IPR029057 -
Viun9g03099 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Viun9g03099 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Viun9g03099 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun9g03099 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Viun9g03099 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03099 Viun-Chr9 38497234 38500855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03099 11 183 PRT Gene Family AT1G27450 69.942 9.62e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03099 K00759 - gmx:100499904 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03099 9 38497234 38500855 Viun9g03099 9 38497234 38500855 ECH
Viun9g03099 9 38497234 38500855 Viun8g00764 8 6637693 6641041 ECH
Viun8g00764 8 6637693 6641041 Viun9g03099 9 38497234 38500855 PCT