Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03097 ATGGCGCAAGATATTGGTAATCCACCAGTTCCTTTTGATTTTGAACTCTTGGTTGATGATCCTGAGAACCTTGGAACTGTCAAAGCCTCATCTAGCAGCACAGACCCATGGATTGAACCTGAAAGGTTAAAACTCAGACACAGGATTGGCCGGGGACCCTTTGGCGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCCAAGATGCTACCTCCTATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTTTGAGTTATATTTTCAGTGCCAAGGAGCGGCTAGGGTGTGCTGGCTACTTGGGATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGTTCGGTTGGTGATAAGATGGCTAGACTCAGAGAGGGAAGGATTTCATTGCCTGATGTTCTTAGGTACGGTATCGATCTGGCTCAAGGTATTATGGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATCCAACGTGCTTCTCAATGATACTGATCAAGCAATACTGGGAGATGTTGGTATTCCAAATCTTCTCTTCGGTTCCTCATTCCTAAGCTCAGATACTGCCAATAGGCTTGGTAGTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTGTATCCTTTGAAACAGATTCATGGGGATTTGGGTGCACTATTGTGGAAATGTTGATTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAGTATATCGATCAGTTGTTGAAAAGTATGAAAAACCCCAGATTCCCAGTGGCCTTCCTTCTTCAATTGAAAATGTCCTCAGTGGCTGCTTTGAATATGACTTGAGGAATCGCCCTTCAATGGTAGATATTCTGTCTGTCTTTAGAAGCTCACGGAATGCAGTAGTCAATGATGGAGGATGGAGATATCTTGGAATTCACAAAACATTAGCAAAATCAAGTAGCACAGGCTACACACAGTGGTCCCTCTCAAAGGATCATCTTCAGGTGGGCGACACAGTGCGCTCTAGAAAGCCTTCCAATTCATGCAATCCACAGAACATGGAGGTCCCAGAAGGAAATGTTGTCGGTAATGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGAGTTCATGACCCTGTAAGGATTCACGCGTCAACTCTTGAACGTGTCACCAATGGTTTAGGAGCCGGGGATTGGGTCCGCATCAAAGAAGAAGATGATAAACACTCGCCAGTGGGTATTCTTCATTCTATCAATCGTGATGGAAGAGTGACTGTTGGATTTATAGGCCTGCGAACTCTTTGGAAAGGAAACTCTTCAGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAATTTATTAGGCTGAAACCCAATGTTCTAAGTCCCCGGTTTGAATGGTTGCGTAGAAGGGGAGGTACCTGGGCCACTGGTAAGATCTCTTGGATCCTACCAAATGGATGTCTAGTTGTGAATTTCCCAGGCATGTTGAACATCTGGAATGCACCAAACACTTTTTTGGCTGATCCCTCTGAGGTTGATGTGGTTAGTTTCAATAATTGTCCAAATATGGTAGAAAAGTATCAACATGTAGAGGATCACCACTGGGCAATTAGACCTGTTCTTATTGCATTTGGCCTTCTTAGTACTGTTAAACTAGGGATGTCAATTGGAAAGAAAATTGGCAGGAACATGAATGTGAATGCAATGGAGAATGAAAATCATTATACTGATAAAAGCCAGAATGCTAGCAGCCCTACTTCTACATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGTGTTAACATGTCCACTGGCCGCTAG 1872 0.4306 MAQDIGNPPVPFDFELLVDDPENLGTVKASSSSTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPIREEHMKTALEKFFELYFQCQGAARVCWLLGISILNGRICIIMNFYEGSVGDKMARLREGRISLPDVLRYGIDLAQGIMELHSKGILVLNLKPSNVLLNDTDQAILGDVGIPNLLFGSSFLSSDTANRLGSPNYMAPEQWQPEVRGPVSFETDSWGFGCTIVEMLIGNQPWYGCPVGEVYRSVVEKYEKPQIPSGLPSSIENVLSGCFEYDLRNRPSMVDILSVFRSSRNAVVNDGGWRYLGIHKTLAKSSSTGYTQWSLSKDHLQVGDTVRSRKPSNSCNPQNMEVPEGNVVGNADHGFVLVRLHGVHDPVRIHASTLERVTNGLGAGDWVRIKEEDDKHSPVGILHSINRDGRVTVGFIGLRTLWKGNSSELEMAESYCVGQFIRLKPNVLSPRFEWLRRRGGTWATGKISWILPNGCLVVNFPGMLNIWNAPNTFLADPSEVDVVSFNNCPNMVEKYQHVEDHHWAIRPVLIAFGLLSTVKLGMSIGKKIGRNMNVNAMENENHYTDKSQNASSPTSTWTSSVANILFREGVNMSTGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03097 623 PANTHER OS06G0639500 PROTEIN 7 619 - -
Viun9g03097 623 Gene3D Transferase(Phosphotransferase) domain 1 129 331 - -
Viun9g03097 623 Gene3D Phosphorylase Kinase; domain 1 19 128 - -
Viun9g03097 623 CDD STKc_PknB_like 44 309 - -
Viun9g03097 623 SUPERFAMILY Protein kinase-like (PK-like) 40 308 IPR011009 -
Viun9g03097 623 ProSiteProfiles Protein kinase domain profile. 43 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03097 623 Pfam Protein tyrosine and serine/threonine kinase 43 305 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03097 Viun-Chr9 38471585 38475685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03097 25 308 MAP Kinase Kinase Kinase AT2G17700 23.611 4.88e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Viun9g03097 PK_Tyr_Ser-Thr 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03097 - - gmx:100780636 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03097 9 38471585 38475685 Viun9g03097 9 38471585 38475685 ECH
Viun9g03097 9 38471585 38475685 Viun8g00767 8 6696880 6700987 ECH
Viun8g00767 8 6696880 6700987 Viun9g03097 9 38471585 38475685 PCT