LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g03082	ATGAGATTAGGTGTGAATAAGCACGTTGTGCGGTGCTCAATCGGCACCGTTTCAGGCGAATCCAAAACTCATTTTCCCGCCAAATCCCAACGTTCATCTTTCTCAGCTGTCAAGTTCCGCCCCGACGATGTTTCTTCAGATTCAGCGGTTTCTAGTAGCAGCAGGAGAGAGGTGATATGCATAGTGACGTGGCCATGTCTTCTTCCTCTCATAGGTTGTCTCCCAGCCAACGCCTTGCAAGCAGGTGCAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGAAAGGTGTTGTCTAAGGGAAAGGCAGCTGGGGTGCTTCGATTGGTTTTCCACGATGCTGGAACCTTTGACGTCAATGACAATTCAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCCGAAAATGCCGGCCTGAAAAAATCAGTAAAGGTTCTGCAAAAGGCAAAGACTCAGATAGATGCCATCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGCCCACCTATCCAAGTTTCACTGGGCAGACTAGATGCACTGGTGCCTGATCCAGAAGGGAGACTCCCCGAGGAATCTCTTAATGCTTCTGGTTTGAAGAAATGTTTCCAGAGCAAAGGCTTATCAACACAAGAACTCGTGGCATTGTCCGGAGCCCATACTATTGGAAGCAAAGGTTTTGGAAGCCCAAATTCTTTTGATAATTCATATTATAAGGTCCTTTTGGAAAAGCCATGGACGTCTTCAGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCATGCCCTTGTTGAGGATGATGAATGCCTAAGATGGATTAAAAAATACGCCGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAAAAACATGTAA	954	0.4549	MRLGVNKHVVRCSIGTVSGESKTHFPAKSQRSSFSAVKFRPDDVSSDSAVSSSSRREVICIVTWPCLLPLIGCLPANALQAGAKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDVNDNSGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDALVPDPEGRLPEESLNASGLKKCFQSKGLSTQELVALSGAHTIGSKGFGSPNSFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRWKNM	317

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun9g03082	317	ProSitePatterns	Peroxidases proximal heme-ligand signature.	224	234	IPR019793	-
	Viun9g03082	317	Pfam	Peroxidase	91	292	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	FunFam	Adenylate/guanylate cyclase	202	304	-	-
	Viun9g03082	317	SUPERFAMILY	Heme-dependent peroxidases	99	316	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	PRINTS	Haem peroxidase superfamily signature	102	116	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	PRINTS	Haem peroxidase superfamily signature	179	191	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	PRINTS	Haem peroxidase superfamily signature	161	178	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	PRINTS	Haem peroxidase superfamily signature	224	239	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun9g03082	317	Gene3D	-	90	311	-	-
	Viun9g03082	317	Gene3D	Peroxidase, domain 2	202	304	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g03082	Viun-Chr9	38417164	38421651	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun9g03082	102	307	Peroxidase	AT4G16270	31.439	4.37e-22	93.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g03082	K00434		-	gmx:100792735	530.791

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