Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03056 ATGAGTGCGGCGTTTCAGTGTTTATCGTGTGCGCGGACTGAACCTTTCCTCACACCACCTCAATCCCTTACTCTTCCTTTCCAACGAAAACCATTTTTCTGCTCTCTTCCTCTTTCCTCTCGCGCTCGTAACCTCTCTTCTTCAATCGTCGCTGCTGCTTCCAAAAAGAGAAAAAACAAGAAAAAACTGTCTCGTCATCATGTTACTGAGGGCGGCGAGGAGGATATGGACGCGTTCGAGCTTCTCTTCAACCAACTCGAACAAGATCTCAAACGCGGTGGTTTGTCAGATGATGATGACGAAGATGGGATAACTGAAGAAGAGATGGCATTGCTTGAACGTGAGTTGGAAAATGCCTTGGGGGACTTTGATGATGAATTGTTGAACTCGGATGTAATCGACGTAGAACTTGGTAGTGATCCAGAGAATGGTGATGAAGATGAAGATGAAGATGAGGATGAGGATGAGGATGAGGATGAGGATGAGGATGACGATGGTGATGGTGATGATAGTGAGAGTGAGGATGGAGATGAAAAGCCACTGAACCTTAAGAATTGGCAGATGAAGAAATTGGCCAGAGCTTTGAAAGCCGGCCGCCGCAAAACAAGTATAAAAAATCTTGCTGCCGATCTTTGTCTTGATAGGGCTCTTGTTCTTCAGTTACTTCGTGATCCTCCTCCAAATCTCTTAATGATGAGTCTTACTATACCTGATGAACCCGCAACAACAGCAGTATCACTTGAAACTAAGCCCGGTGAGATTCTCCTTCAAGAAACAAGTATTGATCAAGTTGAATCTGAACCCGAGGCTAAAGTACCTGTTCATACCTTGCAACGTAATTGGTATGCTCAAAAGCGATTGAAGAAGGCCCATGTTGACACTCTCGAGAGAGTTTATAGGAGATCAAAACGACCTACTAATGCAATGATCAGCAGCATTGTACATGTAACAAACATTCCTCGAAAAAGAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAAGGAGTTCCAGATCACCGTCTACCTTACCAGCGCTCTGTTCCTGAAACCGCTTGA 1059 0.4457 MSAAFQCLSCARTEPFLTPPQSLTLPFQRKPFFCSLPLSSRARNLSSSIVAAASKKRKNKKKLSRHHVTEGGEEDMDAFELLFNQLEQDLKRGGLSDDDDEDGITEEEMALLERELENALGDFDDELLNSDVIDVELGSDPENGDEDEDEDEDEDEDEDEDEDDDGDGDDSESEDGDEKPLNLKNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLTIPDEPATTAVSLETKPGEILLQETSIDQVESEPEAKVPVHTLQRNWYAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVTNIPRKRVVKWFEDKRAEEGVPDHRLPYQRSVPETA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03056 352 CDD homeodomain 284 333 IPR001356 GO:0003677
Viun9g03056 352 SMART HOX_1 284 342 IPR001356 GO:0003677
Viun9g03056 352 Pfam Homeodomain 286 334 IPR001356 GO:0003677
Viun9g03056 352 Gene3D - 280 338 - -
Viun9g03056 352 MobiDBLite consensus disorder prediction 135 185 - -
Viun9g03056 352 SUPERFAMILY Homeodomain-like 280 341 IPR009057 -
Viun9g03056 352 MobiDBLite consensus disorder prediction 138 176 - -
Viun9g03056 352 ProSiteProfiles 'Homeobox' domain profile. 278 338 IPR001356 GO:0003677
Viun9g03056 352 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 11 345 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Viun9g03056 Homeodomain 6.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03056 - - gmx:100798718 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03056 9 38243735 38247127 Viun9g03056 9 38243735 38247127 ECH