Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03036 ATGGAAGCACCATTTAAGGGAATAATTGAAGATTTCAAGGGAAGATATCAATGCTATAAACAAGATTGGATTTGTGATATCTGTTCTGGTCCAAGCACATGGGCTCCAACTTTCTACATATTCTTTGCCTCTGCCCTCCCTGTTATTGTTTTTGGACAGCAACTTCACAGGGATACTGATGGAACTATGGGCATAGTGGAAACAATGGCATCTACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCTGAACCCACTGTCATAATGTACACTTACTTGTTCAGTATTTGCCAAAAAACCCCTGGACTGGGTAGAGAGCTCTTTATGGCTGTGCTTAGTTGGGTTTGTGTTTGGACGGGAATCTTCCTGGTGGTGCTTGCAGTTTTTAATGCTTGCTCAATCATCTCAAGGTTTACAAGAATTGCTGGGGAGTTATTTGGCATGCTCATAACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGAGGAGTTCAACACAGTCAAGGACGAAGATCCTTCTGCAGAGGAATTTCAATTCCAGTGGCTGTATACAAATGGATTACTTGCAATCATTTTCGGTTTTGGATTACTTTTCACTGCCCTAGTAAGCAGAAGAGCAAGATCGTGGAGATATGGAACAGGGTGGCTACGAGGACTTATAGCAGATTATGGGATTCCATTGATGGTAGTGTTATGGACTGCACTATCTTATGCTGTACCAAAAAAAGTTCCAGATGGCGTTCCTAGAAGGCTTGTTTCTCCTCTACCCTGGGAACCTAAATCACTCTATCACTGGACAGTTGTGAAGGATATGTGGAAGGTACCCCCATCTTATGTATTTGGGTCAACTGTTCCAGCTCTGATGATAGCAGGCTTATACTTTTTTGATCACAGTGTAGCTTCGCAGATGGCACAACAGAAAAAATTTAACCTTCAAAAACCAACAGCCTACCACTATGATGTTTTCCTGCTTGGAATAATGACTCTGATTTGTGGGTTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTAGCAGTTCTGAGGAAGAAGGTTAAAGAGTCGGAGACTTCAAAGCAAGCTGTAACGAAATCTAGGAACAATGATGATCCAGAAGCAAGTTTGGAGGAGAAACACAAAGATGAATATCTACCAGTCGAGGTTCATGAGCAAAGAGTGACCAACCTTTTGCAGTCTCTCCTGGTCGGTCTCTCAATCCTAGCCATGCCTGTAATCAGAGAGATACCAACCTCTGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCACCCCAAGCCGCCGTTACAAAATTTTTGAAGGTTCTCATGCCTCTTTTGTGGAAGATGTACCATTCAAGACCATAGCTACATTTACACTCTTACAGTTAGGATATTTTTTAATATGTTACGGGGTGACTTGGATTCCTTATGTTGGAGTACTGTTCCCTGTACCATTCTTCCTTCTCATATTCATAAGAGAACGCGTGCTTCCAAAGATATTCAAGCCTAACCATCTCGAAGAACTAGATGCTTCTGGGTACGAGGAAATTGTTGGAGCTCCACCTGCTTTGAAAATGGATATGGAGCAAGATACTGATACTGTAGGAAGCGAAGAGGACTTCTGCGATGCAGAGATATTAGATGAGATGACAACCCACAGGGGAGAGTTGAAACTGATAACTACCAGCAGAAATCATAGCTTCAGTGATGACAGACACATTCACGTAAATGACTTTTATAGAATCTTTAAGGTTTCGATTTACTGTACTTGTCTAGTATTTACTGTGTTTGTGTGGTGGACTTGCACAGGTTTGTCCTAG 1929 0.4184 MEAPFKGIIEDFKGRYQCYKQDWICDICSGPSTWAPTFYIFFASALPVIVFGQQLHRDTDGTMGIVETMASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLFSICQKTPGLGRELFMAVLSWVCVWTGIFLVVLAVFNACSIISRFTRIAGELFGMLITVLFFQEAIKGLIEEFNTVKDEDPSAEEFQFQWLYTNGLLAIIFGFGLLFTALVSRRARSWRYGTGWLRGLIADYGIPLMVVLWTALSYAVPKKVPDGVPRRLVSPLPWEPKSLYHWTVVKDMWKVPPSYVFGSTVPALMIAGLYFFDHSVASQMAQQKKFNLQKPTAYHYDVFLLGIMTLICGFLGLPPSNGVLPQSPMHTKSLAVLRKKVKESETSKQAVTKSRNNDDPEASLEEKHKDEYLPVEVHEQRVTNLLQSLLVGLSILAMPVIREIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKIFEGSHASFVEDVPFKTIATFTLLQLGYFLICYGVTWIPYVGVLFPVPFFLLIFIRERVLPKIFKPNHLEELDASGYEEIVGAPPALKMDMEQDTDTVGSEEDFCDAEILDEMTTHRGELKLITTSRNHSFSDDRHIHVNDFYRIFKVSIYCTCLVFTVFVWWTCTGLS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03036 642 Pfam HCO3- transporter family 4 179 IPR011531 GO:0006820|GO:0016020
Viun9g03036 642 Pfam HCO3- transporter family 406 496 IPR011531 GO:0006820|GO:0016020
Viun9g03036 642 Pfam HCO3- transporter family 197 378 IPR011531 GO:0006820|GO:0016020
Viun9g03036 642 MobiDBLite consensus disorder prediction 376 397 - -
Viun9g03036 642 PANTHER ANION EXCHANGE PROTEIN 3 554 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03036 Viun-Chr9 38113281 38118904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03036 4 608 Antiporters AT4G32510 60.363 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03036 K24194 - gmx:100787412 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03036 9 38113281 38118904 Viun9g03036 9 38113281 38118904 ECH
Viun9g03036 9 38113281 38118904 Viun8g00818 8 7249873 7255565 ECH
Viun8g00818 8 7249873 7255565 Viun9g03036 9 38113281 38118904 PCT