Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03028 ATGGAAAGTGATGAACTGAGAGCTGCAAGTGCACGCATAGGGAGCTCCAGCGTGTGGAGAAGCAGTGGTGTTGATGTGTTTTCAGGGTCTTCAAGAAGAGAAGAGGATGAACAAGAGCTTAAATGGGCTGCTATTGAGAAACTCCCCACGTATCTACGCATGACTAGGGGCATTCTCACCGAGGCTGAAGGCCAACCTCCTACAGAGATTCATATAAACAAACTTGGTCCACTTCAGAGGAAGAACTTGGTGGAGAGGCTTGTCAAGATTGCAGAACAAGATAATGAGAAGTTCTTGTTCAAGTTAAGGGACCGCATTGATCGTGTTGGACTTGAAATTCCCACCATTGAAGTTCGTTTTGAGCACTTGAATGTCGAGGCAGAAGCTCATGTGGGAAGCAGAGCACTACCTACAATCTTTAACTTCTGCATTAATTTGTTGGAGGGGTTCCTCAATTCTCTTCACCTTATTCCCAGTCGAAAGAAGCCATTCACAGTTCTTGATGATGTCAGTGGAATCATCAAGCCTAAAAGAATGACACTTCTTTTAGGCCCTCCAAGCTCCGGAAAGACCACATTATTGTTGGCACTGGCTGGAAGACTTGGGAAAGATCTCAAATTTTCGGGGCGAGTTTCGTATAATGGTCGTGGGATGGAGGAATTTGTGCCTCAGAGAACATCAGCTTACATAAGTCAAACGGATCTACACATAGGAGAAATGACAGTGAGAGAAACATTGGCCTTTTCAGCAAGGTGTCAAGGGATTGGAACGCGTTATGAGATGCTGGCAGAACTGTCAAGAAGAGAGAAGGCTGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAACCAATGTGGTTACTGATTATATAATGAAGATTTTGGGACTGGAAGTTTGTGCGGATACCATGGTAGGGGATGACATGATTCGGGGTATTTCTGGCGGACAGAAGAAAAGAGTCACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTTTTCATGGATGAAATTTCAACTGGTTTAGACAGTTCTACCACATTCCAAATGGTTAATTCTCTGAGACAATCTATCCACATTCTGAATGGAACAGCTGTGATCTCTCTTCTCCAGCCAGCACCAGAAACTTACGAGTTATTTGATGATATTATTCTCCTCTCAGATGGGCAAATTGTGTATCAGGGTCCAAGGGAAAATGTGCTTGAGTTCTTTGAATACATGGGGTTCAAATGTCCAGAGAGGAAAGGAGTAGCAGATTTTTTACAAGAAGTAACATCAAGAAAAGACCAAGAACAATATTGGGCAAACAAAGATGAGCCATACATCTTCGTCACTGTTAGAGAGTTTGCCGAGGCATTTCAGTCATTTCACATTGGTCGAAAACTTGGTGATGAACTTGCCACCCCATTTGACATGTCCAAAGGCCACCCTGCTGTGTTAACAAAGAACAAGTACGGTGTCAGCAAGAAGGAGCTTTTGAAAGCTTGCGTGTCCAGAGAATTCTTACTTATGAAAAGGAATTCGTTTGTCTATATTTTCAAGATGTGGCAATTGATTTTAACGGGGTTCATAACAATGACATTGTTCCTGAGAACTGAGATGCACCGGGATACTGAAACTGATGGTGGTATCTTTATGGGTGCATTGTTCTTCGTACTAATTGTGATCATGTTCAATGGATACTCCGAGCTATCCATGTCCATCATGAAACTCCCCGTTTTCTATAAGCAAAGGGACCTTCTCTTTTTTCCTCCTTGGGCATATTCTCTGCCTACATGGATCCTTAAGATTCCTATAACCCTAGTGGAAGTTGGAATTTGGGTTGTGATGACTTACTATGTTATAGGATTTGATCCTAGTATTGAAAGGTTCATCAAGCAGTACTTTCTGCTTGTTTGTATCAACCAGATGGCATCTGGGCTTTTTCGATTTATGGGGGCAGTTGGGAGGAACATCATCGTTGCAAACACAGTTGGGTCATTTGCTTTACTTGCAGTCATGGTCATGGGTGGATTTATCCTATCTAGAGTTGATGTGAAGAGGTGGTGGCTGTGGGGTTACTGGTTCTCGCCCATGATGTATGCACAGAATGCTCTAGCTGTTAATGAATTTCTCGGAAAGAGTTGGTTACATGTTCCACCAAATTCAACAGAACCATTAGGAGTGAAGGTGTTGAAGTCAAGAGGGATATTCCCTGAAGCATACTGGTATTGGATTGGTGTTGGAGCTTCCATCGGATACATGTTACTGTTCAACTTCCTTTTCCCCTTGGCATTACAATATCTTGACCCATTTGGAAAACCCCAAGCTTTAATATCAGAAGAAGCCTTAGCTGAGAGAAATGCAGGCAGAAACGAACACATAATTGAATTATCGTCTAGATTCAAAGGCTCTTCTGATAAAGGGAATGAAAATCGCAGAAGTGTGTGCTCCAGAACTCTGTCGTCAAGAGTGGGTAGCATTGGTGCAAGCGAGCACAAGACGAAGCGAGGGATGGTTCTTCCTTTCACACCCCTTTCTATTACTTTTGATGAAATCAGATATGCGGTGGAGATGCCACAGGAAATGAAGAACCAAGGCATTCTTGAAGATCGACTAGAACTGTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTGACAGCTCTGATGGGTGTAAGTGGTGCTGGTAAAACAACTTTAATGGACGTGTTATCTGGAAGGAAATCGGCAGGTTATATTCAAGGGCAAATCACCATATCCGGTTACCCTAAAAAGCAAGAAACTTTTGCCCGCATAGCAGGATACTGTGAGCAAACCGATATCCACTCTCCCCATGTTACAGTATATGAGTCTTTGGTTTATTCTGCATGGCTTCGGTTACCACCTGAGGTTGATTATGCAACTAGACAGATGTTCATTGAGGAAGTTATGCAGCTGGTAGAACTGACTTCACTAAGAGAAGCCTTGGTGGGATTGCCAGGAGTGAATGGCTTGTCCACGGAGCAGAGAAAGAGGTTAACAATTGCAGTAGAACTTGTTGCCAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCCAGAGCTGCTGCTATAGTTATGAGAACAGTGAGGAACACAGTGGATACCGGGCGAACCGTGGTCTGCACAATTCACCAGCCTAGCATTGATATATTTGATGCTTTTGATGAGCTACTTCTGTTGAAGCGTGGAGGTGAGGAAATATATGTGGGGCCTCTAGGCCAGCATTGTTCTCAACTGATAAGTTATTTTGAGGGAATTAATGGGGTGCCAAAGATTAAGAATGGTTATAATCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAACTTCACTGAAATATACAAGAATTCTGACCTATATAGGAGAAACAAGGCCTTGATATGGGAACTTAGCACACCTCCATCAGGTTCCAAAGACTTGTACTTCCCCACAAAGTACTCACGGACTTTCTTCACTCAATGCATGGCTTGCCTTTGGAAACAACACCTATCATACTGGAGAAATCCCCCATACAGTGCAGTGAGACTTTTATTCACAACAATCATAGCCTTACTGTTTGGGACAATATTTTGGGATATTGGCTCTAAAAGGCAAAGAAGACAAGATATATTTAATGCAATGGGGTCCATGTATGCTGCAGTCCTCTTCATCGGGATACAAAATTCTACATCTGTGCAACCTGTTGTAGCCATTGAGAGAACAGTGTTCTACAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTACCATACGCATTTGGACAGGTTGCCATTGAGATCCCATACATACTCATACAGACCCTCGTGTATGGGGTGATAGTGTATGCTATGATTGGGTTTGATTGGACACTCGGCAAGTTCTTTTGGTATCTCTTCTTCATGTTCTTCACCTTTTTATACTTCACCTTCTATGGCATGATGGCTGTGGGTCTTACCCCAGATCACAACGTTGCTGCTATAGTTTCCTTTGGGTTCTACATGATATGGAACCTCTTCTCAGGATTTGTGATTCCAAGAACAAGGATGCCAGTGTGGTGGAGATGGTACTTTTGGATCTGTCCTGTGTCCTGGACCTTGTATGGATTGGTAACTTCACAATTTGGTGACATAAAAGATCGTATAGAGAGTGGAGAGAGTGTGGAAGAGTTTGTTAGGAGTTACTTTGGGTATAGAGATGACTTTGTAGGTGTAGCTGCTGCTGTGCTTGTTGGGTTTTCACTACTTTTTGGATTTACCTTTGCCTTCTCAATCAAGGCATTCAATTTCCAAAAGAGATGA 4350 0.4292 MESDELRAASARIGSSSVWRSSGVDVFSGSSRREEDEQELKWAAIEKLPTYLRMTRGILTEAEGQPPTEIHINKLGPLQRKNLVERLVKIAEQDNEKFLFKLRDRIDRVGLEIPTIEVRFEHLNVEAEAHVGSRALPTIFNFCINLLEGFLNSLHLIPSRKKPFTVLDDVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLGKDLKFSGRVSYNGRGMEEFVPQRTSAYISQTDLHIGEMTVRETLAFSARCQGIGTRYEMLAELSRREKAENIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLEVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYIFVTVREFAEAFQSFHIGRKLGDELATPFDMSKGHPAVLTKNKYGVSKKELLKACVSREFLLMKRNSFVYIFKMWQLILTGFITMTLFLRTEMHRDTETDGGIFMGALFFVLIVIMFNGYSELSMSIMKLPVFYKQRDLLFFPPWAYSLPTWILKIPITLVEVGIWVVMTYYVIGFDPSIERFIKQYFLLVCINQMASGLFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRVDVKRWWLWGYWFSPMMYAQNALAVNEFLGKSWLHVPPNSTEPLGVKVLKSRGIFPEAYWYWIGVGASIGYMLLFNFLFPLALQYLDPFGKPQALISEEALAERNAGRNEHIIELSSRFKGSSDKGNENRRSVCSRTLSSRVGSIGASEHKTKRGMVLPFTPLSITFDEIRYAVEMPQEMKNQGILEDRLELLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLSGRKSAGYIQGQITISGYPKKQETFARIAGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDYATRQMFIEEVMQLVELTSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGQHCSQLISYFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVNFTEIYKNSDLYRRNKALIWELSTPPSGSKDLYFPTKYSRTFFTQCMACLWKQHLSYWRNPPYSAVRLLFTTIIALLFGTIFWDIGSKRQRRQDIFNAMGSMYAAVLFIGIQNSTSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEIPYILIQTLVYGVIVYAMIGFDWTLGKFFWYLFFMFFTFLYFTFYGMMAVGLTPDHNVAAIVSFGFYMIWNLFSGFVIPRTRMPVWWRWYFWICPVSWTLYGLVTSQFGDIKDRIESGESVEEFVRSYFGYRDDFVGVAAAVLVGFSLLFGFTFAFSIKAFNFQKR 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03028 1449 Pfam ABC-transporter N-terminal 91 142 IPR029481 -
Viun9g03028 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
Viun9g03028 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 424 IPR027417 -
Viun9g03028 1449 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Viun9g03028 1449 Pfam ABC-2 type transporter 1177 1391 IPR013525 GO:0016020|GO:0140359
Viun9g03028 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 852 1104 IPR003439 GO:0005524
Viun9g03028 1449 Gene3D - 867 1099 IPR027417 -
Viun9g03028 1449 MobiDBLite consensus disorder prediction 14 28 - -
Viun9g03028 1449 FunFam ABC transporter G family member 34 154 458 - -
Viun9g03028 1449 CDD ABCG_PDR_domain2 849 1087 IPR034003 -
Viun9g03028 1449 SMART AAA_5 176 408 IPR003593 GO:0016887
Viun9g03028 1449 SMART AAA_5 889 1081 IPR003593 GO:0016887
Viun9g03028 1449 Pfam ABC-2 type transporter 382 434 IPR043926 GO:0140359
Viun9g03028 1449 Pfam ABC transporter 880 1032 IPR003439 GO:0005524
Viun9g03028 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1091 IPR027417 -
Viun9g03028 1449 Gene3D - 153 462 IPR027417 -
Viun9g03028 1449 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Viun9g03028 1449 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1449 - -
Viun9g03028 1449 Pfam Plant PDR ABC transporter associated 720 783 IPR013581 -
Viun9g03028 1449 MobiDBLite consensus disorder prediction 1 30 - -
Viun9g03028 1449 FunFam ABC transporter G family member 40 866 1096 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03028 Viun-Chr9 38075333 38082495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03028 890 1106 Calmodulin-binding Proteins AT2G36910 25.893 2.17e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03028 K08711 - gmx:100804030 2730.67