Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03027 ATGGAAGAAATTGAAGGGGTGGATTGTTGCAGTAAAAGTGAAAGCAGGAGCTCTAGTGGGACTCGACCTCCCAATCCCAACCCACCTTCACATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCATAAAAACAAATTTGTGCGATGCATCTGAGCCAGGGGATGTTACTGAAGATTGCCAGACTGATTTCTTTCCAACGCTTCGTTCTGGAGCTTGCGCTGATATTGGATTTCGGTCAAGTATGGAGGATGTATATGTTTGTGTTGACAATTTTATGCACGATTATGGACTCAAGAGTTGTATAGATGGACCCAGTGCTTTCTATGGGGTGTTTGATGGACATGGCGGAAAGCATGCTGCGGACTTTGCCTGCCAGCATCTGCCAAAGTTTATTCTCAATGATGAAGATTTCCCTGGAGACATTGAAAGGATAGTTGCTTCGGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCACTGGATGCTGCACTTGCATCAGGCACCACTGCATTAGCTACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCGAATGCCGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCGATTGAGATGTCAAGAGATCATAAACCGAGTTGCAACAAAGAGAGGAAGCGGATCGAGGCTTCTGGGGGGTATGTGTACGATGGATATCTTAACGGGCAACTGAATGTTGCTCGAGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGATGGTGGACCACTGAGTTCAGAACCCGAACTCATGACTACAAAACTGACGAGCGAGGACGAATTTCTGATCATAGGTTGTGATGGTATTTGGGATGTATTCCGGAGCCAAAATGCAGTGGATTTCGCCCGGCGCAGGCTCCAGGAGCATAATGACCCAACCATGTGCAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAGAGTGGAGACAATTTGTCTGCGGTTGTGATTTGCTTCCAGCAGCAACCTCCTCCCAACTTGGTGGCCCCTCGCTCCAGAGTGCACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAGAGTTTCCTTGACAGCTTGGGTAATTGA 1107 0.4806 MEEIEGVDCCSKSESRSSSGTRPPNPNPPSHRQCKLVRHASLIKTNLCDASEPGDVTEDCQTDFFPTLRSGACADIGFRSSMEDVYVCVDNFMHDYGLKSCIDGPSAFYGVFDGHGGKHAADFACQHLPKFILNDEDFPGDIERIVASAFLQTDNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPSCNKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLSSEPELMTTKLTSEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03027 368 FunFam Probable protein phosphatase 2C 22 54 335 - -
Viun9g03027 368 CDD PP2Cc 69 332 IPR001932 -
Viun9g03027 368 MobiDBLite consensus disorder prediction 1 32 - -
Viun9g03027 368 SUPERFAMILY PP2C-like 64 334 IPR036457 -
Viun9g03027 368 Gene3D - 51 336 IPR036457 -
Viun9g03027 368 PANTHER PROTEIN PHOSPHATASE 2C 37 330 IPR015655 GO:0004722|GO:0006470
Viun9g03027 368 ProSiteProfiles PPM-type phosphatase domain profile. 69 332 IPR001932 -
Viun9g03027 368 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Viun9g03027 368 SMART PP2C_4 59 330 IPR001932 -
Viun9g03027 368 Pfam Protein phosphatase 2C 71 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03027 Viun-Chr9 38071169 38074068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03027 1 368 PP2C-type Phosphatase Gene Family AT2G25620 66.582 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03027 K14803 - gmx:100815725 673.7