Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03011 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACCAGCAACACTCTCAACCACACTTTGGTTCTTCATGACTTTCTGGGCATGAAGCCCGCAGCTGATTCTCCAAAAACCACCGATGTAAGGTTGTCGGAACCGTCGGCCTCCGCCTCCTCCGCTGGTGGACGTGGCCCTTTCTCAGCCACCTCCGACATCGCTTCTGAGAAACAGGTAGGAAACCATCTTGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATCTTTCTGGTGCTGAGATCAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCGCTTTTACTGGTTCCTCCAGAGAGGCCTTCCAAATGGTCCCAGATTCCTATCAAAACTCACATTTGATGAAGGTTCTCCGGAATGCAGCTGGAGATAGGTCTAGAAGGCCAAATGATGAGGAAGTGTTACTTGGTATGCAGTCACTGAAACAATCTTCTCCTCAGATATTTCAGCCTCCAACCAGCACTAAGATTGATGCCAATAAGTGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCAGTATCCACCTCGTGGAGGGCAATTGGCACCTTTTGTCCACCAAATGGCCTCAAGCAAGATCAGGGATACCAATGCTGGCCCTTCATTCATTTCTCAGTCTGCTGCTGATGAAGGGTCTAGAACTGGAATCAAAGGCCCTGGAATTTTAAGTTCTATAAACGTTGCTGCTGCTGTGGCTGCTGAGAAAACTCCATCTGCTATTATGCTTGGTAGCAGCAGGCCAAAACCTGGAAGTAATATCATAGAATCATCCACTCCTCCAAGCAATCAACCCACCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAACGGTGGATCTTGGTCGACTGCGTTCTCGCCTAAATCCGGTGTAAAAATGGTTAATGATGGGAATTTGCACAGCGGAGAAAATGAAACAGGTGCAGTGAATAATGTAGCATTCCCACAGGACCTTCATGGGAAACTCTCTATTACTGCAAGTTCTAGCCATGCCATGGTGTCTGGTGATCGAGTAACTACTACTGCAGGGGCACACCAAGGTAGCGTTTTTGCTAAAGATACCAGAAATCCAGTCCAACCATCAGATCCCAGTTCCGAAGACAAAAGAGGACAATGA 1245 0.4739 MAVLLRMAQPHNGNTSNTLNHTLVLHDFLGMKPAADSPKTTDVRLSEPSASASSAGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGAEISNRLVGSKRSNSDSAFTGSSREAFQMVPDSYQNSHLMKVLRNAAGDRSRRPNDEEVLLGMQSLKQSSPQIFQPPTSTKIDANKWERSILMNVGPSMQYPPRGGQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINVAAAVAAEKTPSAIMLGSSRPKPGSNIIESSTPPSNQPTLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSGVKMVNDGNLHSGENETGAVNNVAFPQDLHGKLSITASSSHAMVSGDRVTTTAGAHQGSVFAKDTRNPVQPSDPSSEDKRGQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03011 414 Pfam tify domain 286 318 IPR010399 -
Viun9g03011 414 ProSiteProfiles Tify domain profile. 284 319 IPR010399 -
Viun9g03011 414 MobiDBLite consensus disorder prediction 267 285 - -
Viun9g03011 414 MobiDBLite consensus disorder prediction 379 414 - -
Viun9g03011 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 362 IPR040390 -
Viun9g03011 414 MobiDBLite consensus disorder prediction 42 64 - -
Viun9g03011 414 SMART tify_2 284 319 IPR010399 -
Viun9g03011 414 MobiDBLite consensus disorder prediction 35 64 - -
Viun9g03011 414 MobiDBLite consensus disorder prediction 259 285 - -
Viun9g03011 414 MobiDBLite consensus disorder prediction 379 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03011 Viun-Chr9 37919330 37924642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03011 23 317 Tify Gene Family AT4G32570 42.122 2.36e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun9g03011 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03011 - - gmx:100807222 698.353