Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03010 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACCAGCAACACTCTCAACCACACTTTGGTTCTTCATGACTTTCTGGGCATGAAGCCCGCAGCTGATTCTCCAAAAACCACCGATGTAAGGTTGTCGGAACCGTCGGCCTCCGCCTCCTCCGCTGGTGGACGTGGCCCTTTCTCAGCCACCTCCGACATCGCTTCTGAGAAACAGGTAGGAAACCATCTTGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATCTTTCTGGTGCTGAGATCAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCGCTTTTACTGGTTCCTCCAGAGAGGCCTTCCAAATGGTCCCAGATTCCTATCAAAACTCACATTTGATGAAGGTTCTCCGGAATGCAGCTGGAGATAGGTCTAGAAGGCCAAATGATGAGGAAGTGTTACTTGGTATGCAGTCACTGAAACAATCTTCTCCTCAGATATTTCAGCCTCCAACCAGCACTAAGATTGATGCCAATAAGTGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCAGTATCCACCTCGTGGAGGGCAATTGGCACCTTTTGTCCACCAAATGGCCTCAAGCAAGATCAGGGATACCAATGCTGGCCCTTCATTCATTTCTCAGTCTGCTGCTGATGAAGGGTCTAGAACTGGAATCAAAGGCCCTGGAATTTTAAGTTCTATAAACGTTGCTGCTGCTGTGGCTGCTGAGAAAACTCCATCTGCTATTATGCTTGGTAGCAGCAGGCCAAAACCTGGAAGTAATATCATAGAATCATCCACTCCTCCAAGCAATCAACCCACCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGTTATGCATGCAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAACGGTGGATCTTGGTCGACTGCGTTCTCGCCTAAATCCGGTGTAAAAATGGTTAATGATGGGAATTTGCACAGCGGAGAAAATGAAACAGGTGCAGTGAATAATGTAGCATTCCCACAGGACCTTCATGGGAAACTCTCTATTACTGCAAGTTCTAGCCATGCCATGGTGTCTGGTGATCGAGTAACTACTACTGCAGGGGCACACCAAGGTAGCGTTTTTGCTAAAGATACCAGAAATCCAGTCCAACCATCAGATCCCAGTTCCGAAGACAAAAGAGGACAATGA 1257 0.4733 MAVLLRMAQPHNGNTSNTLNHTLVLHDFLGMKPAADSPKTTDVRLSEPSASASSAGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGAEISNRLVGSKRSNSDSAFTGSSREAFQMVPDSYQNSHLMKVLRNAAGDRSRRPNDEEVLLGMQSLKQSSPQIFQPPTSTKIDANKWERSILMNVGPSMQYPPRGGQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINVAAAVAAEKTPSAIMLGSSRPKPGSNIIESSTPPSNQPTLTSASRQMTIFYGGQAHVFDDVHPHKLCMQADVIMALAGSNGGSWSTAFSPKSGVKMVNDGNLHSGENETGAVNNVAFPQDLHGKLSITASSSHAMVSGDRVTTTAGAHQGSVFAKDTRNPVQPSDPSSEDKRGQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03010 418 ProSiteProfiles Tify domain profile. 284 319 IPR010399 -
Viun9g03010 418 MobiDBLite consensus disorder prediction 267 285 - -
Viun9g03010 418 MobiDBLite consensus disorder prediction 42 64 - -
Viun9g03010 418 MobiDBLite consensus disorder prediction 381 418 - -
Viun9g03010 418 MobiDBLite consensus disorder prediction 381 412 - -
Viun9g03010 418 Pfam tify domain 286 322 IPR010399 -
Viun9g03010 418 MobiDBLite consensus disorder prediction 35 64 - -
Viun9g03010 418 MobiDBLite consensus disorder prediction 259 285 - -
Viun9g03010 418 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 363 IPR040390 -
Viun9g03010 418 SMART tify_2 284 323 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03010 Viun-Chr9 37919325 37924642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03010 23 321 Tify Gene Family AT4G32570 41.587 3.89e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun9g03010 tify 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03010 - - gmx:100807222 692.575