Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02934 ATGGCGATGGAGTTGATGAGCTTGCCGAAAATGGAGGAACAGAAGGCAATTCAAGAAGCAGCCATGGAGGGTCTCAAGGGAATGGAAAACTTCATTCATCTTCTCTCCAACCAACCCTCTCATCTCAACACTCACCTCACCCAAGCAACCGTTTCAAACTTCAAAAAGCTCATCTCTTTGCTCAACCGAACCGGCCACGCCCGTTTCCGTCGCGCGCCTCTCCCTTCAAATAACCAACCCACTCCACCGGCTAACCCGGTCACCGTCCACCAACCTCCCACCACCTTCGCCCCCACCCACTCGCACACTCTCACTCTCGATTTCACCAAACCTAACATCTTCGCCGCCACCAACAATAAGTCCTTGGATCTCGAATTCTCCAAAGAAACCTTCAGCGTCTCCTCCAACTCCTCCTCCTTCATCTCCTCCGCCATCACCGCCGACGGCAGCGTCTCCAACGGCAACCAAGCCTCCTCTCTCTTCCTCACCTCGCCTCCGCCGCCTTCTTCCTCCGGGAAACCGCCTCTCGTCAAGAAGCGGTGCCACGACCACTCCGACGACGTCTCCGGCTCCACCAAGTGCCACTGCATTAAGAGAAGGAAGAATCGGGTGAAGAAGACGGTGAGAGTGCCGGCGATAAGTACGAAAATCGCCGATATTCCGTCGGACGAGTTCTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTATCCGAGGGGTTATTACAAGTGCAGTACGGTGAGAGGATGTCCGGCGAGGAAACACGTGGAACGTGCTTCGGACGATCCGACGATGTTGGTTGTGACGTACGAGGGGGAGCACCGTCACTCCATTCAGACAGCGTTGCAGGAGAACATTTCCGGCGCCGTGGGTTTGGTTTTTCAGTCAACATAG 903 0.5537 MAMELMSLPKMEEQKAIQEAAMEGLKGMENFIHLLSNQPSHLNTHLTQATVSNFKKLISLLNRTGHARFRRAPLPSNNQPTPPANPVTVHQPPTTFAPTHSHTLTLDFTKPNIFAATNNKSLDLEFSKETFSVSSNSSSFISSAITADGSVSNGNQASSLFLTSPPPPSSSGKPPLVKKRCHDHSDDVSGSTKCHCIKRRKNRVKKTVRVPAISTKIADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLVVTYEGEHRHSIQTALQENISGAVGLVFQST 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02934 300 FunFam WRKY transcription factor 65 205 282 - -
Viun9g02934 300 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02934 300 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02934 300 Gene3D WRKY domain 208 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g02934 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 283 IPR044810 GO:0003700
Viun9g02934 300 Pfam Plant zinc cluster domain 178 219 IPR018872 -
Viun9g02934 300 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02934 300 MobiDBLite consensus disorder prediction 156 185 - -
Viun9g02934 300 SUPERFAMILY WRKY DNA-binding domain 219 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02934 Viun-Chr9 37462384 37464005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02934 1 299 WRKY Transcription Factor Family AT2G24570 58.589 2.08e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g02934 WRKY 6.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02934 - - gmx:100127394 425.246