Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02927 ATGTGGTTGCCTAAGAATCGATCAGATAAAAAGGATGGTGTGAGTGGATTAGTAGCAGTGGCAATTGATAAAAAGAAAGAGAGCCAATCTGCACTCAAATGGGCCGTTGACAATCTCCTCACCAGAAGTGCAACAGTAATTCTCATCCATGTCAAGCTTCTCGCACCATCTCTGTCTCCATCACCTTCTCTTTTCGCCCCTAGGATAAGTTCTTTCCTTGGTGATGATCCTTCAGCATTAAGCAAAGAACACGACGGCCAAAACAGAAATGTTTTCCTCCCATATCGTGTCTTCTGTACAAGGAAAGATATTCAATGCAAGGATGTCCTACTAGAAGATTCAGAAGTACCTAGAGCTGTAATTGAATATGCTTCTCAGACAGGAGTTGAGCATCTGGTTCTTGGCTCTTCAGCAAAAACTAGTTTGCTCAAAAGGTTCAAGGTATCAGATATTCCAGGAGAAATTTCAAAAGGGGCGCCAGATTTCTGCACCGTCTATATTATTGCCAAAGGAAAGATCCAAACTATGCGATCTGCTACTCGTCCTGCACCTGCCATTTTCTCTAACCAGCTCTGTCAAGGTAACAATGGCAGGTCAAACCTTTCAGAGCCAAATGTGTACTCAGGTCAAAGCATAAGAGATCAAGAAGCGCATTCCTTTGATACTTCATCACAGTATGACGAAAATTTCAGGTCACCATTTACTAGGAAACGTTACAATGGCAGACATTATGGGGACACTCCGAATTTAGATACGGACATATCCTTTGTAAGCTCTGGAAGGAGAAGCACAGATCGTTTGATCCCTTCAATGAACTTAGATACAGGAATATCCAACAGTCGGCTATCATATAGTTCAGACATAGATGCAAACTTCAGCTTTGAGTCAGCACCTTTTCCAAGGAAGTCAGTGGAAATGAGCTCTCCTCTTGAATTATCATCATTCTCATTTGAGAGTGATAAGCAATCATCTAGTTCCTCACAAACAGCGGATGACATGGAAGCAGAAATGAGAAGATTGAAGTTGGAGCTGAAGCAGACCATGGAAATGTATAACACAGCTTGTAAAGAAGCACTCACAGCACAACAGAAGGCAGTGGAACTTCAGCGGTGGAAACTAGAGGAAGAGAGGAGATTGGAAGAAGCAAGGCTGGCTGAGGAAGCAGCACTGGCAATTGCAGAAAAGGAGAAAGCAAAGTCAAAAGCAGCCATTGAAGCTGCTGAAGCACAGAAGAGGATTGCAGAACTGGAGGCACAGAAGAGACTCAATGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAAAGAAAAGTGCTTGAATCTTTAAATGTAGATGTCAGGTATAGAAAATACAGTATTGAGGAGATTGAAGCAGCAACAAATTTCTTTTCAGAATCCCTTAAAATTGGAGAAGGAGGATATGGTCCCGTTTTCAGGTGCCTCTTAGATCACACCCCTGTTGCAGTCAAGGTTCTACGCCCTGATGCACAACAAGGAAGATCACAGTTTCAGCGAGAGGTTGAAGTATTGAGCTGCATACGGCATCCACACATGGTTCTACTCCTAGGAGCATGTCCAGAATATGGATGTCTGGTGTATGAATACATGGCAAATGGAAGCTTGGAAGATCGGCTCTTTCGACTAGGCAACACTCCCCCACTTCCATGGCAGCTAAGATTCAAGATAGCAGCAGAGATTGGCACAGGCCTGCTGTTCCTGCACCAGACAAAACCGGAACCTCTGGTGCACAGGGACTTGAAACCAGCCAACATCTTGCTTGACAGAAACTTCGTGTCCAAAATCAGTGATGTAGGTTTGGCCAGGCTAGTTCCGCCATCTGTGGCAGACTCTGTGACGCAGTATCACATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGAATGTTGGGAGTGAAATCAGACATATACTCCCTTGGGATAATCTTTTTGCAAATTTTGACAGCAAAATCACCAATGGGTTTGACCCATCATGTTGCAAGGGCCATTGAGAAGGGAACTTTATCTGAGTTGTTGGATCCATCACTCTCTGATTGGCCACAAGAGGAGGCTTTGACATTTGCCAAGTTGGGAGTGCAGTGTGCTGAATTAAGGCGCAGAGACAGACCTGATCTTGGCAAGGTTGTCCTACCAGAACTACACAGACTAAGAAACCTTGCTGAAGATACTCACCTTATCTCAGCTTTGGGTAACCCTACCAATATACCCCGAGACATGTCTGACAGACCAGTTTCAGCAGTACTGGAAGGAGATTGTCCTCCATTTCCTAATGCTGTCGCGGGGGAAATTAGAGCTAATAATTCAGTGGCTTTCTGA 2355 0.4425 MWLPKNRSDKKDGVSGLVAVAIDKKKESQSALKWAVDNLLTRSATVILIHVKLLAPSLSPSPSLFAPRISSFLGDDPSALSKEHDGQNRNVFLPYRVFCTRKDIQCKDVLLEDSEVPRAVIEYASQTGVEHLVLGSSAKTSLLKRFKVSDIPGEISKGAPDFCTVYIIAKGKIQTMRSATRPAPAIFSNQLCQGNNGRSNLSEPNVYSGQSIRDQEAHSFDTSSQYDENFRSPFTRKRYNGRHYGDTPNLDTDISFVSSGRRSTDRLIPSMNLDTGISNSRLSYSSDIDANFSFESAPFPRKSVEMSSPLELSSFSFESDKQSSSSSQTADDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALRESEEKRKVLESLNVDVRYRKYSIEEIEAATNFFSESLKIGEGGYGPVFRCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPHMVLLLGACPEYGCLVYEYMANGSLEDRLFRLGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYHMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVARAIEKGTLSELLDPSLSDWPQEEALTFAKLGVQCAELRRRDRPDLGKVVLPELHRLRNLAEDTHLISALGNPTNIPRDMSDRPVSAVLEGDCPPFPNAVAGEIRANNSVAF 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02927 784 MobiDBLite consensus disorder prediction 315 334 - -
Viun9g02927 784 Coils Coil 330 350 - -
Viun9g02927 784 Pfam Universal stress protein family 18 145 IPR006016 -
Viun9g02927 784 SUPERFAMILY Protein kinase-like (PK-like) 440 722 IPR011009 -
Viun9g02927 784 MobiDBLite consensus disorder prediction 194 226 - -
Viun9g02927 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Viun9g02927 784 ProSiteProfiles Protein kinase domain profile. 463 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02927 784 Gene3D Phosphorylase Kinase; domain 1 442 535 - -
Viun9g02927 784 CDD STK_N 17 171 - -
Viun9g02927 784 SMART serkin_6 463 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02927 784 Gene3D Transferase(Phosphotransferase) domain 1 536 741 - -
Viun9g02927 784 Coils Coil 356 442 - -
Viun9g02927 784 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 436 535 - -
Viun9g02927 784 MobiDBLite consensus disorder prediction 315 331 - -
Viun9g02927 784 Pfam Protein kinase domain 465 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02927 784 PANTHER OS02G0152300 PROTEIN 18 754 - -
Viun9g02927 784 FunFam U-box domain-containing protein 51 536 736 - -
Viun9g02927 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Viun9g02927 784 Gene3D HUPs 18 160 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02927 Viun-Chr9 37400139 37407173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02927 1 736 Receptor kinase-like Gene Family AT1G78940 55.952 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Viun9g02927 Pkinase 2.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02927 - - gmx:100803867 1107.43