Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02921 ATGGCGCATATGCATATGCTACACTGCTTCTGTCTTCTCATCCTCTTCACTTGCTTTTGGCCTTCACTCGCTGACAATGCTCAAGTTCTGATAAACTTCAAGAGATTCTTGTCCAATGCTGATGCTTTAAGCAACTGGGGGAACCAATCTATTGGTGTGTGTAGCTGGACTGGTGTACTGTGTTTCAATCAGAGTTTTCATGGCTTGAGATTAGAACACATGGGACTCGGTGGCACTGTTGACGTAGACACGCTGCTTCAGTTGTCTAATTTGAACAGCTTTAGTGTCATCAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGAGTTTAAGGGCTTTGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATCCCAGATGATGCTTTTGATGGCATGATACGTCTCAAGAGAGTGTTCTTGGCTGAAAATGACTTCACGGGTCATATTCCCACGTCCTTGGTCGAATTGCCTAAACTTTTGGATGTGGATATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTAAACAGAGTGATTTCAGAGTGTTTAATTTGTCTTACAACAAGTTAGAGGGTCGAATACCAGAAAGCTTAAGCAGCAAGGATCCAACTTCATTTGCTGGTAATCAAGGTCTATGTGGAAGTCCTCTAAGCCCCTGCGTTGGAAACCCCACCCCACCCGCGAAACCTGATCAACCACCAGATTCAAATACAGGGAAAGAAAACAAGAAAAAACGCATTATTTTAACAGTTATTGTAGTGGTGGGGGTGATTGTGCTGGCTTCAATACTAGCACTCGTGATCATCCGTTACCGTCGAAAGAAACCCGTGCTGGTCAAAGATGCACAACCCCAACCCCAGAACGTTACTCCGTTTTCTAGCGAGTCCAAATCCATTGTTGTGACAGCTGAATCCAAGAAAAGTGAAGACGGAGGGTTGAACTTCGTTGGGAACGAGAGGGAGGGAATTGACCTGCAAGACCTGCTAAGGGCCTCGGCTGAAGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGGCCGGTGGTGGTGGTGAAGAGATTCAAGAACATGAACGACGTGGGGAAGAAAGAGTTTTTTGACCACATGAACAGGCTCGGAAAATTGTCACACCCGAATCTACTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCATGACTTTGCTGAAAATGGCAGCTTGGCCAGTCATCTTCACGGAAGGAGTGGTGTTGAGTTGAACTGGGGAACTCGTTTGAAGATCATAAAAGGAGTGGCGAGGGGATTGGCATATCTGTACAGGGAGTTCCCCAACCAAGCTTTACCGCACGGTCATCTGAAATCGTCGAACGTTGTACTGGACGGTTCCTTCGAGGCTCGTTTGGCGGAGTACGGACTTGTGGCGGTGGTGGAGAAGAGCCATGCTCAGCAGTTCATGGTGGGTTACAAGTCTCCAGAGGCGAGCCAGTTTGAGAAGCCGAGCGAGAAGAGCGACGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTCTGACGGGGAAGTTCCCTGCGAGTTATCTGAGGCATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCCATAGTGAGCGAAGGGTGGAGCGGGGAGGTGCTTGATAAGGGGATTCCTGGGAGAGGGAACGGAGAGGGTGAGATGGTGAAGCTGTTAAGGATTGGAATGGGGTGCTGCGAATGGAGCTTGGAGAGTAGGTGGGGTTGGAAGGAGGCTGTGGCAAAGATTGAGGAGTTGAAGGAGAGTGATGATGGTGGTGAAGGTGGAAGTGAAGGGGATAATCTCTACTCACTTTCTACCAGTCTCGATGACTTCTCTCTCTCGCACTCTATTTCATGA 1920 0.4792 MAHMHMLHCFCLLILFTCFWPSLADNAQVLINFKRFLSNADALSNWGNQSIGVCSWTGVLCFNQSFHGLRLEHMGLGGTVDVDTLLQLSNLNSFSVINNNFEGPMPEFKKIVSLRALFLSNNKFSGEIPDDAFDGMIRLKRVFLAENDFTGHIPTSLVELPKLLDVDIHGNSFEGNIPEFKQSDFRVFNLSYNKLEGRIPESLSSKDPTSFAGNQGLCGSPLSPCVGNPTPPAKPDQPPDSNTGKENKKKRIILTVIVVVGVIVLASILALVIIRYRRKKPVLVKDAQPQPQNVTPFSSESKSIVVTAESKKSEDGGLNFVGNEREGIDLQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKNMNDVGKKEFFDHMNRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWGTRLKIIKGVARGLAYLYREFPNQALPHGHLKSSNVVLDGSFEARLAEYGLVAVVEKSHAQQFMVGYKSPEASQFEKPSEKSDVWCLGILILELLTGKFPASYLRHGKGASEDLAAWVNSIVSEGWSGEVLDKGIPGRGNGEGEMVKLLRIGMGCCEWSLESRWGWKEAVAKIEELKESDDGGEGGSEGDNLYSLSTSLDDFSLSHSIS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02921 639 ProSiteProfiles Protein kinase domain profile. 335 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02921 639 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Viun9g02921 639 MobiDBLite consensus disorder prediction 222 246 - -
Viun9g02921 639 Gene3D Transferase(Phosphotransferase) domain 1 411 618 - -
Viun9g02921 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 610 IPR046959 -
Viun9g02921 639 Gene3D Ribonuclease Inhibitor 186 225 IPR032675 -
Viun9g02921 639 Gene3D Phosphorylase Kinase; domain 1 300 410 - -
Viun9g02921 639 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Viun9g02921 639 SUPERFAMILY L domain-like 27 218 - -
Viun9g02921 639 SUPERFAMILY Protein kinase-like (PK-like) 339 604 IPR011009 -
Viun9g02921 639 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 82 177 - -
Viun9g02921 639 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Viun9g02921 639 Pfam Protein kinase domain 338 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02921 639 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02921 Viun-Chr9 37385710 37388348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02921 6 631 Receptor kinase-like Gene Family AT5G35390 43.846 8.46e-179 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun9g02921 Pkinase 4.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02921 - - gmx:100803999 947.192