Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02912 ATGGATCCTACTAAGAAACCCAACAAGATCAGGGACATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGTTGCAAACTCTTCAAGAACAAGCAGCAACAGCAACAGCAACAACAACAACAACAACAACAGTAACACCAGCAGAAGCATAAAATTTCTGAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCGTGGAGCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACAAAGCCTTTCACATGTTGCTCAGAGAAGCTGAGGAAGAGTTCGGGTTTGAACAAACCGGGGTTCTCAGAATCCCTTGTGAAGTTTCCGTGTTCGAGAGTATCTTGAAGATAGTGGAGCGAAAGGACAGGTTTTTCACTCAGAAATGCAGGTTTAGCATTGAGAAAATGATGGGTTACTGTTCCTCCAACAACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAGATAG 528 0.4413 MDPTKKPNKIRDIVRLQQILKKWRRVANSSRTSSNSNSNNNNNNNSNTSRSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDRFFTQKCRFSIEKMMGYCSSNNLAYSHQPQSPMCR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02912 175 Pfam Auxin responsive protein 22 135 IPR003676 GO:0009733
Viun9g02912 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 132 IPR003676 GO:0009733
Viun9g02912 175 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02912 Viun-Chr9 37349014 37349878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02912 4 175 Calmodulin-binding Proteins AT4G31320 52.332 9.22e-59 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02912 K14488 - pvu:PHAVU_009G103800g 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02912 9 37349014 37349878 Viun9g02912 9 37349014 37349878 ECH