Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02903 ATGCAAAAGGAAAAGGAAGCCATTATGAAGGAGGGAACGGATATAGAAATGGAAGGAACACATGCAAAAGAGGAAACCCTACCACCAGGATTTCGATTTCATCCTACCGATGAAGAACTTGTCACTTGCTATCTCCTAAATAAGATTTCAGATTCTAATTTCACAGGCAGAGCAATAACTGATGTAGATCTCAACAAAAGTGAGCCATGGGAGCTTCCAGGGAAAGCTAAGATGGGTGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCAACTGGTGTGAGAACCAATCGAGCAACGAACACAGGGTATTGGAAGACAACAGGGAAAGACAAAGAGATCCTCAACAGTGGAACATCGGAATTGATTGGCATGAAGAAGACTTTAGTTTTCTACAAAGGAAGAGCTCCTAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGCATTCACTCAAAATCCAGCTTCAGAACTACCAGGCAGGATGAATGGGTGGTTTGCAGGGTATTCAAGAAGAGTGGTGGGGCAAAAAAGTTCCCTTCTTCCAACCATGGAAGAGCAGTGAATCCTTACAGTTTAGAAATAGGGCAAAATATTATGCAGGCACCAGTGATGCAAATGGGAGATCCTGCTGCTCATTTCCTTTATGGAAGGAACTACATGAACAGTGTTGAGTTAGGTGAACTTGCTAGGGTTTTAAGAGGGGGTGGATCAACAAGTAGTGTCAACCAACCAATGCAATCCCAATTAGGGTACCCTACATCAGCAGGATTCACCATTTCAGGACTAAATTTGAATCTAGGAGGAGCAACAACCACAACACAACCCGTTTTTCGACCGATGCAAGCTTCTTCTGCTCCTCCTGTCCATACAATGGGTCAAGTTCTTGATGTGAATTCCAGCATGATGACAACGGGTTCTCTTGGTGCAGATGTAGGTTATGGATCAGAAATGAGTAACATGAATTCTCAAGGGAATAGGTTCATGGGCATGGAGCATTGCATGGATCTTGACAACTATTGGCCTTCCTACTAA 1047 0.4336 MQKEKEAIMKEGTDIEMEGTHAKEETLPPGFRFHPTDEELVTCYLLNKISDSNFTGRAITDVDLNKSEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSGTSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRTTRQDEWVVCRVFKKSGGAKKFPSSNHGRAVNPYSLEIGQNIMQAPVMQMGDPAAHFLYGRNYMNSVELGELARVLRGGGSTSSVNQPMQSQLGYPTSAGFTISGLNLNLGGATTTTQPVFRPMQASSAPPVHTMGQVLDVNSSMMTTGSLGADVGYGSEMSNMNSQGNRFMGMEHCMDLDNYWPSY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02903 348 SUPERFAMILY NAC domain 20 176 IPR036093 GO:0003677|GO:0006355
Viun9g02903 348 FunFam NAC domain-containing protein 100-like 36 180 - -
Viun9g02903 348 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Viun9g02903 348 ProSiteProfiles NAC domain profile. 27 176 IPR003441 GO:0003677|GO:0006355
Viun9g02903 348 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 242 - -
Viun9g02903 348 Gene3D NAC domain 36 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02903 Viun-Chr9 37290241 37292661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02903 23 348 NAC Transcription Factor Family AT2G24430 53.666 1.77e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g02903 NAM 4.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02903 - - gmx:100804931 600.897