Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02898 ATGCATTATATGCATGAACTACGCCTAATCCACACTGATCTGAAGCCAGAAAATATTCTTCTGGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGACCTGTGGAGTGTTGGATGTATTCTTATCGAACTATGCACGGGTGAGGCATTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCAGAGCACATGATTCGAAGGTCCAATAAGGGCGCAGAAAAGTATTTCAAGCGTGGATCAAGACTAAGATGGCCTGAAGGAGCTATTTCTAGGGAGAGCATCAATGCAGTAAAGAAGCTCGGTCATCTGAAGGATATTGTATCTCGAAGTGTGGACTCTTCAAGGTCCTCCTTAACTGACTTGTTACATGGCTTATTATCATATGACCCAACCAAACGGCTAACAGCTCTTCAAGCTCTCGATCATCCCTTCTTTAGGAATCCAACCTGA 654 0.4281 MHYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPIPEHMIRRSNKGAEKYFKRGSRLRWPEGAISRESINAVKKLGHLKDIVSRSVDSSRSSLTDLLHGLLSYDPTKRLTALQALDHPFFRNPT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02898 217 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 215 - -
Viun9g02898 217 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Viun9g02898 217 SUPERFAMILY Protein kinase-like (PK-like) 1 215 IPR011009 -
Viun9g02898 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Viun9g02898 217 SMART serkin_6 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02898 217 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02898 217 Pfam Protein kinase domain 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02898 217 FunFam Serine/threonine-protein kinase AFC2 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02898 Viun-Chr9 37271099 37274631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02898 52 216 EF-hand Containing Proteins AT5G22840 33.149 1.33e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Viun9g02898 Pkinase 7.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02898 K08287 - gmx:100782453 405.986