Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02860 ATGGAAGGTGAGAGGACGATCCCTGCTGTAGATGGGGTGACAGATGGCGTTCAGAAAATTAGAGCTCTGCACGGGAGGACTACTGGCCCAACCAGGCGCTCTACAAAAGGACAATGGACTCCTGAAGAGGACGAGACTTTGCGGAAGGCTGTCCAGCGTTTTAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAGTGCTTGCATAGGTGGCAGAAAGTCTTAAATCCAGAACTTGTCAAAGGGCCATGGTCTAAAGAGGAGGATGAAATCATTATTGATTTGGTGAATCGATATGGGCCCAAGAAATGGTCTACTATCGCACAGAAGTTACCTGGACGCATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACTCAGGAAGAGGAGTTGGCTCTCATACGTGCGCATCAGATTTATGGGAACAAATGGGCAGAACTAGCGAAGTTATTACCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAACAGTTCCGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAGTTACAAAATGTACCACTTGCTGGAAATCCGAATCAACCTATTGCTTCTGTCTCTTCGAGGTTGCAGCAGAGTGGAGAAGATAATGGTCCTAGGGGGACTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCCGGTTACTTTTCATCAGCCAGAGAGATGAACAGTGTTGCTTTACTCACTGGAGAGGAATACAGGCCAAATGATGAGCCTAGTCAAGCATCCTGTTCAGAGCCATATTACGTGTCTCTCGACGAAGTAACTGCATCACTTCCAGACATGCCTGACCAAGAGATTTGCACTTCTCAATTCGTTGAACAGAAATATTCACACAACCCTGGAAATTCCAATAACGGGGAAGGCCAACTTGATTTAATTGACTTGACCAATATTTCCTCACTGGACTTTGGGCAGGAATCATCACAGTTCCAAAATGATTGCATGATGAATGTTCCGTTTCAGACTTCGGGGGGGTTAGGTGTCGCAACAACCATGCAACCGACATCTATGGACTCTGTTAAACCCGAACACATGTTGATGTCTGACGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGCGATGAATGTTTTTCTTCTGAAGATTATAATAAAGGTGTAAATATGGTTGATTTATTAGGAGGCCCCTCATTTCTTTGTCAGTCAACATTACAATCTGTCCCCTCAGTTGTTTCTTCTTCTGGAGATAGGTTGATGTATACGGCCGAAGCCAATCAGTTGGTTGGGTCAGAGGATCAGCAGTTTGTCTCCAGAACGCAGGATAGCATAATTTATGCCAGTGACTTGTCCAGTCCTCCTTGTATTCGTAGGATAGACAACACTGAAATGCAAGAGCCATCAGATGTTGTCAAAGATGATTCGAAATTGGTCCCTGTAAATAGTTTTGGCTGTGGATCAGACGCAAAGTCAACTTCATATCCAACGGACGAAAACTCAAATGTGCATACAGAACAGGACACAGGTGCTCTATGTTATGAACCTCCCCGCTTCCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAGACAGGGGGCGATATGCAGCAAGAATTCAGTCCCCTTGGTATCCGCCAATTTATGATGTCTTCTATGAACTGTCTAACTCCTTTTAGATTATGGGACTCGCCTTCTCGGGATGATAGCCCAGATGCCTTGTTAAAAAGTGCGGCTAAAACCTTCACAAGTACACCATCTATATTAAAGAAACGAAACCGAGATCTCTTATCTCCATTGTCGGATAAAAGAATTGACAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGATGACAATGAGACTCAGGGAGCAGATTTGATTCCTCAATCTTCAATGCCAAAAAGGGACTCTGGTACCTCTGTTGAAGATGATAAAGAGAATTGTGGACAAGCTGTTAAAGTGGAACTAGTAGGGGGAAAAAATAAGCATGCTATTTTGGACGACAAAATATCTGAAAAAGATTCAGGTGATGGTAATTCTCAGGAAAAAATTAAGCAGCAACCTGTTGCTGTTGGTTCTGCGATCGATAATGACGGTAGCGCTGCCGCGGAGATTGTCCAACAACCGTCAGGAGTTTTGGTTGAACATGATGTGAATGACCTATTAATGTATTCACCAGATCAAGTAAAAGTTCTTAGTTTAAGTGCGAGAACTAAAAAAAATCCATGCTCAAGGATTAATTCACCATCTGTTTGGTTAAAGGAGCATGAAAGACTTTCAGTTGCCGTTACTTGTATACATTCTGTCAGTTCATCAGGCCCGGGGGAGAATTCGGGTGATCACACTGGAAATGATGGTGGTTTGGAAACATGTAGCATATTTGGTGGAACACCATTTAGGAAAAGCATCGAGTCGCCTTCAGCATGGAAATCTCCTTGGTTCATCAACACTTTTTTGTCCAGCCCCAGGATTGATACTGAAATTACCATTGAGGATTTTGGGTACTTTATGAGCCCTGGTGACAGAAGCTATGATGCAATCGGGTTGATGAAACAGATTAATGAACAAACTGCTGCTCAGTATGCCAGTGCTCATGAGATCTTAGGAAATGAAACTCCTAAGGCGTTACCTAAAGGTAAGTCCAGAAACGATGAGGATGAAGACCGGGAAGATATCGATCCTAATAATCAGCGTGGGGACTGTTCTCAGTCGGCTTCAAGTTCCTTGGTGGAACGACGTGTGCTTGACTTTAGTGAATGTGGAACTCCGGTCAAAGGTGATAGCAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCAACTTCGTATTTGTTGAAGGGCTGTAGATAA 2955 0.4291 MEGERTIPAVDGVTDGVQKIRALHGRTTGPTRRSTKGQWTPEEDETLRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQKLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNKWAELAKLLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQNVPLAGNPNQPIASVSSRLQQSGEDNGPRGTEGEEVSQCSQESANAGYFSSAREMNSVALLTGEEYRPNDEPSQASCSEPYYVSLDEVTASLPDMPDQEICTSQFVEQKYSHNPGNSNNGEGQLDLIDLTNISSLDFGQESSQFQNDCMMNVPFQTSGGLGVATTMQPTSMDSVKPEHMLMSDDECCRILFSEAISDECFSSEDYNKGVNMVDLLGGPSFLCQSTLQSVPSVVSSSGDRLMYTAEANQLVGSEDQQFVSRTQDSIIYASDLSSPPCIRRIDNTEMQEPSDVVKDDSKLVPVNSFGCGSDAKSTSYPTDENSNVHTEQDTGALCYEPPRFPSLDIPFLSCDLIQTGGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDSPDALLKSAAKTFTSTPSILKKRNRDLLSPLSDKRIDKKLEIEMTSTLIKNFSRLDVMFDDNETQGADLIPQSSMPKRDSGTSVEDDKENCGQAVKVELVGGKNKHAILDDKISEKDSGDGNSQEKIKQQPVAVGSAIDNDGSAAAEIVQQPSGVLVEHDVNDLLMYSPDQVKVLSLSARTKKNPCSRINSPSVWLKEHERLSVAVTCIHSVSSSGPGENSGDHTGNDGGLETCSIFGGTPFRKSIESPSAWKSPWFINTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQINEQTAAQYASAHEILGNETPKALPKGKSRNDEDEDREDIDPNNQRGDCSQSASSSLVERRVLDFSECGTPVKGDSSKSSAMSFSSPTSYLLKGCR 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02860 984 MobiDBLite consensus disorder prediction 659 682 - -
Viun9g02860 984 MobiDBLite consensus disorder prediction 209 247 - -
Viun9g02860 984 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Viun9g02860 984 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
Viun9g02860 984 MobiDBLite consensus disorder prediction 960 978 - -
Viun9g02860 984 MobiDBLite consensus disorder prediction 933 947 - -
Viun9g02860 984 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 138 IPR017930 -
Viun9g02860 984 SMART sant 87 136 IPR001005 -
Viun9g02860 984 SMART sant 35 84 IPR001005 -
Viun9g02860 984 SMART sant 139 187 IPR001005 -
Viun9g02860 984 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 189 IPR017930 -
Viun9g02860 984 Gene3D - 88 139 - -
Viun9g02860 984 PANTHER MYB PROTEIN-RELATED 36 109 - -
Viun9g02860 984 SUPERFAMILY Homeodomain-like 85 181 IPR009057 -
Viun9g02860 984 Gene3D - 141 201 - -
Viun9g02860 984 Gene3D - 35 87 - -
Viun9g02860 984 ProSiteProfiles Myb-like domain profile. 83 134 IPR001005 -
Viun9g02860 984 FunFam Transcriptional activator Myb isoform A 88 140 - -
Viun9g02860 984 MobiDBLite consensus disorder prediction 704 724 - -
Viun9g02860 984 MobiDBLite consensus disorder prediction 913 932 - -
Viun9g02860 984 CDD SANT 142 182 IPR001005 -
Viun9g02860 984 CDD SANT 39 82 IPR001005 -
Viun9g02860 984 FunFam Transcriptional activator Myb isoform A 35 87 - -
Viun9g02860 984 CDD SANT 90 134 IPR001005 -
Viun9g02860 984 FunFam Transcription factor MYB3R-2 141 203 - -
Viun9g02860 984 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Viun9g02860 984 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Viun9g02860 984 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Viun9g02860 984 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Viun9g02860 984 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Viun9g02860 984 MobiDBLite consensus disorder prediction 902 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02860 Viun-Chr9 37021733 37029545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02860 20 984 MYB Transcription Factor Family AT4G32730 43.954 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun9g02860 Myb_DNA-binding 4.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02860 - K09420 gmx:100811335 1700.26