Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02825 ATGGACAGGGTCATCGGCGGCAAGTTTAAGACTGGTCGGAAAATCGGAAGCGGTTCATTTGGAGAAATTTATATTGCCTCAAATATGGACACCTCGGAGATTGTTGCCATCAAGATGGAAAGCAAGAGGACCAAACATCCACAACTATTGTACGAGGCAAAGTTATATAGCATTCTTCAAGGAGGAAATGGTGTTCCAAGTATGAAGTGGTGCGGTACTGATGGAGACAATAATGTTCTGGTTATTGATCTTCTGGGACGGAGTCTTGAAGATTTTTTTGTGTATTGCGGGAGGAAATTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACAAGAATAGAGTACCTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAATTTTCTTATGGGTCTTGGGAAGAAATCAAATCAGGTTTATATTATTGATTTTGGACTAGCAAAAAGATATAGGGATCCAAACACAAATAAGCACATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCCCGTTATGCAAGTTGCAACACTCACATGGGAATTGAACAAAGTCGCCGTGATGATTTGGAGTCTCTTGGCTATGTTCTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCTACCAAAAAGGAAAAATATGACAGTATCTGTGACAAGAAGTTATCTACTCCCATTGAGGTGCTCTGCAAGTCATATCCTGTGGAGTTTGCTACATACTTTCATTATTGCCAATCTTTGACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCCTGTTTAGTGATTTGTTCAAACGAGAAAGATATGATTCCGACTGTGTATATGACTGGACCATCCTCAAATATCAGCAGTCTCAGCAGACAAAGAAACAAAATCAATCATCTCCTTCAACTGCATTGCCTAGCAATCTAGAACCAGCAGTTGTGGAAAACCATAAAGGAGCCAATGGTTCAACTCATGCTAATATAACAAATATGTTAGCTAGTCTTGAACTCCCAAGTGCACGTGCGCAGCCTAAGCCATCTAATACTCGTAATGTGGATGCCAAGATTCGGACTGAGAAACATGGTGTGAACAATGTTCCATCTAGTTCCTCTGCCTTGCCCAAATCCTCTACAGGAAACGTCTCGAAACCAGAAAAGTCCACAGGAACCTCAAACCTTGGTCGTGTATTTGGGAGTAATTCCCGTGTTTCAAGCAGCTGGATCCCTTCACTACGCCGAATTTCTTCCGCCAAATAG 1281 0.4106 MDRVIGGKFKTGRKIGSGSFGEIYIASNMDTSEIVAIKMESKRTKHPQLLYEAKLYSILQGGNGVPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKSNQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDSICDKKLSTPIEVLCKSYPVEFATYFHYCQSLTFDQHPDYGYLKRLFSDLFKRERYDSDCVYDWTILKYQQSQQTKKQNQSSPSTALPSNLEPAVVENHKGANGSTHANITNMLASLELPSARAQPKPSNTRNVDAKIRTEKHGVNNVPSSSSALPKSSTGNVSKPEKSTGTSNLGRVFGSNSRVSSSWIPSLRRISSAK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02825 426 MobiDBLite consensus disorder prediction 370 426 - -
Viun9g02825 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Viun9g02825 426 MobiDBLite consensus disorder prediction 346 426 - -
Viun9g02825 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02825 426 Pfam Protein kinase domain 9 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02825 426 FunFam Casein kinase I isoform delta-like 1 339 - -
Viun9g02825 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Viun9g02825 426 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02825 426 PANTHER CASEIN KINASE-RELATED 13 331 - -
Viun9g02825 426 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Viun9g02825 426 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02825 Viun-Chr9 36832409 36838066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02825 9 236 AGC Kinase Gene Family AT3G08720 26.724 1.35e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Viun9g02825 Pkinase 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02825 K08960 - gmx:100792736 759.985