Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02822 ATGGCATCATTCTTAATGTTACCAACTGCTTCAATGCTGAGACCATCGACCACTTCATCGTCTTCTACACGAAGACTTGCTCTCTTTCACCTTGTCACCACCGGTGCTATTGCTCTCCCACAATGTAAGCTGTTTGGTCCAAAAGGATCAGATTTGTTAAAAGTAGCAGAGGCTACTGCTGCAGAAAATGTAGCCCAGCAAGAGAAAATTTTGTTTGATTGGGTTAAAAATGACAACAGAAGATTTCTCCATGTTGTGTACCGTGTTGGGGACTTGGAGAAGACTATAAAGTTCTACACTGAATGCCTTGGCATGAAGCTATTGAGAAAACGTGATATACCTGAAGATAGATATTCTAACGCTTTTCTTGGATATGGACCCGAAGATTCTAATTTTACAGCTGAACTTACATACAATTATGGAGTGGATAACTATGACATTGGAAGTGGCTTTGGTCATTTTGGTGTTGCAGTTGAAGACATTTACAAGAGAGTAGATCTAATAAAGGCAAAAGGAGGAAAGGTTACAAGGGAACCAGGGCCTGTTAGAGATGGCAGTTCAGTAATTGCCTTCATTGAAGATCCTGATGGTTATAAGTTTGAACTTTTGGAGAGAAGACCTACATCTGAACCTCTATGCCAAGTGATGCTTCGAGTAGGCGATCTCGATCGTGCCATAGCCTTCTATAAAAAAGCTGTCGGAATGAAACTTCTCCGCAAGAAGGACAATCCTGAAGACAAGTACACAGTAGCCTTTATGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTAACATATAACTATGGCGTCACTGACTACGACAAAGGAAATGGTTACGCTCAGATTGCAATAGGCACAAATGATGTCTATAAGACTGCAGAAGCAATCAAATTATCTGGGGGGAAGATTATCCGTGAACCTGGGCCCTTGCCTGGTATCAACACCAAGATTGTAGCTTGCTTGGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 1032 0.4109 MASFLMLPTASMLRPSTTSSSSTRRLALFHLVTTGAIALPQCKLFGPKGSDLLKVAEATAAENVAQQEKILFDWVKNDNRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYSNAFLGYGPEDSNFTAELTYNYGVDNYDIGSGFGHFGVAVEDIYKRVDLIKAKGGKVTREPGPVRDGSSVIAFIEDPDGYKFELLERRPTSEPLCQVMLRVGDLDRAIAFYKKAVGMKLLRKKDNPEDKYTVAFMGYGPEDKNTVLELTYNYGVTDYDKGNGYAQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPGINTKIVACLDPDGWKLVFVDNVDFLKELE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02822 343 ProSitePatterns Glyoxalase I signature 1. 84 105 IPR018146 GO:0004462|GO:0046872
Viun9g02822 343 NCBIfam lactoylglutathione lyase 82 206 IPR004361 GO:0004462|GO:0046872
Viun9g02822 343 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 212 335 IPR029068 -
Viun9g02822 343 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 81 205 IPR037523 -
Viun9g02822 343 FunFam Lactoylglutathione lyase 208 343 - -
Viun9g02822 343 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 211 335 IPR037523 -
Viun9g02822 343 PANTHER LACTOYLGLUTATHIONE LYASE 60 343 - -
Viun9g02822 343 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 82 202 IPR004360 -
Viun9g02822 343 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 214 331 IPR004360 -
Viun9g02822 343 Gene3D - 53 207 IPR029068 -
Viun9g02822 343 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 80 207 IPR029068 -
Viun9g02822 343 CDD GlxI_Ni 83 203 - -
Viun9g02822 343 Gene3D - 208 343 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02822 Viun-Chr9 36824763 36828451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02822 214 334 Calmodulin-binding Proteins AT1G08110 26.712 7.15e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02822 K01759 - gmx:100810908 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02822 9 36824763 36828451 Viun9g02822 9 36824763 36828451 ECH