Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02795 ATGGCCAAAGGATCTTCAAAGACAAAATCCATGACATTTATATGCCTCTTCTTGTTCATGCTCAACTTCCACTCATCCCACGGAGATCCAAAAGAGGTTCAGCTTTTGTTATCCCTCAAAGCTTCCATCGATGACCCGCTTCACTTTCTCTCCAACTGGGAAACTTCCTCTGCCACTTCATGCAGGTGGCATGGCGTCACCTGCGACAACAACGTTAACGCTTCCCACGTTAACGCTGTGGTGCTCTCGGGAAAAAACATGACCGGCGAGGTCTCCTCTATTTTTCAACTTCCATACGTCGCAAACATCGACCTTTCAAATAACCAGTTTGTTGGGGAAATCACTTTTAACTACTCTCTCAATTCTCTGTCTCCACTTCGTTACCTTAACCTCAGCAACAACAACTTCACGGGTTCTTTGCCTCAGCCATTGTTTTCCGTGCTTTTCTCAAACCTTGAAACTCTGGATCTCTCCAACAACATGTTTTCAGGGAACATACCTCACCGAATTGGATTGCTTTCCAGCCTGAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCACCAACATGACCACTTTGCAGTACCTTACGCTGGCTTCAAACCAGTTAGTGGATAAGATACCACAGGAAATTGGCCGAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAAGTAGCATTGGAGAGTTACTCTCTTTGAATCATCTCGACCTTGTCTACAACAACCTCACTGGACCTATTCCTCAGTCTCTCGGACACCTCACCGAGCTTCAATATCTCTTTCTTTATCAAAACAAACTGAGTGGTCCAATTCCACAATCCATTTTCGAACTGAAAAAGCTCATTTCACTCGATCTCAGTGATAACTCTCTTTCGGGTTTGATTTCTGAGCGCGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAATTTCACTGGGAAGATTCCAAAGGGTGTTGCATTTTTGCCTCGGCTCCAGGTTCTTCAGCTATGGTCAAACGGATTAATAGGTGAGATTCCTGAGGAGCTTGGAAAACACAGCAACCTCACTGTGCTGGACCTCTCCACCAACAACCTCGCAGGGAAGATTCCAGATAACATATGCCACTCAGGTAGTCTTTTCAAGCTGATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCGAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTGAGACTACAAAACAACAAGTTCTCGGGGAAATTACCACCGGAGTTAACCACACTGCCTCAGGTATACTTCTTGGATATCTCTGGAAACCAACTTTCGGGAAGGATCGATGAACGAAAATGGGACATGCCGTCGCTTCAAATGCTCAGTTTGGCCAACAACAACTTCTCTGGAGAACTCCCTAGCTCTTTCGGGACACAAATTCTTGAGGACTTGGACTTATCAAACAACCAATTCTCAGGTTCTATTCCACTAGATTATAAAAGCTTATCCGAGCTGGTGGAATTGAAGCTCAGCAATAACAAACTCTTTGGTAACATTCCAGAAGAAATTTGCTCGTGCAAGAAGCTTGTAGCCTTAGATTTGAGTCACAACCAGCTCAGTGGTGAAATTCCGATGAAATTCTCCGGGATGCCGGTTCTCGGCCTCCTTGACCTGTCAGAAAACCAATTCTCCGGCGAGATTCCGCAGGATTTGGGCAGCACCGAGTCTCTCGTTCAGATCAACATTTCACACAACCATTTTCGTGGAAGTTTACCTTCTACCGGCGCTTTCCTCGCCATCAACGCTAGTGCAGTCACCGGCAACAACCTTTGCGACCGTGATGATGACTCTTCAAGCGGGTTGCCACTGTGCAAAAGCAATAACCAGAACCCAACCTGGCTCTTCATCATGCTGTGTTTTCTACTAGCACTGGTTGCGTTCGCAGCAGCTTCTTTACTCATCTTCTATGTTCACAAGAGAAAGAGCTTGTCGGAAGTGCGAAAAGTGGAAAACGAAGACGGAACCTGGGAAGTGCAGTTCTTTTGTTCGAAAGCAGCGAGGTCGATGAAGGTGGATAATGTTTTCTCTGCTGTTAAAGAGGGAAGAGTTGTGTCCAAAGGAAGGAACTGGGTTTCCTACGAAGGGAAGTGCTTGGAGAATGGCATGCAGTTCATGGTAATGGAAATCAGTGACTTGAATTCTCTTTCGACGAGTATGTGGGAAGAGACAGTGAAGGGTGGAAAGGTTCGTCACCCCAATATCTTCAATCTTATGGGGACGTGTAGGTGTGGAAAGAGAGGGTACTTGGTGTACGAACACGAAGAGAGTAAGAAACTAAGCGAGATTGTGAATAGTTTAAGTTGGAAACAGCGTTGCAAGATTGCTGTTGGCGTTTCAAAAGCGATTAAATTCCTGCATTCTCACGCTTCATCCATGGTTTTGGTGGGAGAGGTTGCAAGGGAGATAGTTAGGGTCGACAGCAAAGGTGTCCCTCGCCTTAAGGTCACCCCTCCCATAATGACATGTTTGCCATACCTTGCCCAAGAGACAAGAGAAAGGAAAAATGTGACAGAGAAGAGTGAGATATATGGGTTGGGAGTTATGCTGATTGAACTATTAACGGGAAGGAACGCCATAGACATAGAAGCAGGCAATGGCATGCAGAAGACTATTGTGGAGTGGGCCCGTTACTGCTACTCTGATTGTCATGTTGACACGTGGATTGATCCTGTGATGAAAGGTGGAGATGCATTGAGGTATGAGAAGGAGATGGTTGAGATGATGAATGTAGCGCTGCACTGCACCACAACAGATCCCAGTGCAAGGCCATGCGCAAGAGATGTAGTGAAAGCCCTAGAGAGTTTTCAGAGAACTAGTTTTTGTTGA 2904 0.458 MAKGSSKTKSMTFICLFLFMLNFHSSHGDPKEVQLLLSLKASIDDPLHFLSNWETSSATSCRWHGVTCDNNVNASHVNAVVLSGKNMTGEVSSIFQLPYVANIDLSNNQFVGEITFNYSLNSLSPLRYLNLSNNNFTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPHRIGLLSSLRYLDLGGNVLVGKIPNSITNMTTLQYLTLASNQLVDKIPQEIGRMKSLKWIYLGYNNLSGEIPSSIGELLSLNHLDLVYNNLTGPIPQSLGHLTELQYLFLYQNKLSGPIPQSIFELKKLISLDLSDNSLSGLISERVVQLQRLEILHLFSNNFTGKIPKGVAFLPRLQVLQLWSNGLIGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICHSGSLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQNNKFSGKLPPELTTLPQVYFLDISGNQLSGRIDERKWDMPSLQMLSLANNNFSGELPSSFGTQILEDLDLSNNQFSGSIPLDYKSLSELVELKLSNNKLFGNIPEEICSCKKLVALDLSHNQLSGEIPMKFSGMPVLGLLDLSENQFSGEIPQDLGSTESLVQINISHNHFRGSLPSTGAFLAINASAVTGNNLCDRDDDSSSGLPLCKSNNQNPTWLFIMLCFLLALVAFAAASLLIFYVHKRKSLSEVRKVENEDGTWEVQFFCSKAARSMKVDNVFSAVKEGRVVSKGRNWVSYEGKCLENGMQFMVMEISDLNSLSTSMWEETVKGGKVRHPNIFNLMGTCRCGKRGYLVYEHEESKKLSEIVNSLSWKQRCKIAVGVSKAIKFLHSHASSMVLVGEVAREIVRVDSKGVPRLKVTPPIMTCLPYLAQETRERKNVTEKSEIYGLGVMLIELLTGRNAIDIEAGNGMQKTIVEWARYCYSDCHVDTWIDPVMKGGDALRYEKEMVEMMNVALHCTTTDPSARPCARDVVKALESFQRTSFC 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02795 967 Gene3D Ribonuclease Inhibitor 238 339 IPR032675 -
Viun9g02795 967 SMART serkin_6 704 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02795 967 SUPERFAMILY L domain-like 315 629 - -
Viun9g02795 967 Gene3D Ribonuclease Inhibitor 31 144 IPR032675 -
Viun9g02795 967 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Viun9g02795 967 Gene3D Ribonuclease Inhibitor 340 637 IPR032675 -
Viun9g02795 967 Gene3D Ribonuclease Inhibitor 145 237 IPR032675 -
Viun9g02795 967 SMART LRR_sd22_2 269 295 - -
Viun9g02795 967 SMART LRR_sd22_2 365 388 - -
Viun9g02795 967 SMART LRR_sd22_2 173 199 - -
Viun9g02795 967 SMART LRR_sd22_2 532 558 - -
Viun9g02795 967 SMART LRR_sd22_2 508 527 - -
Viun9g02795 967 SMART LRR_sd22_2 149 168 - -
Viun9g02795 967 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Viun9g02795 967 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Viun9g02795 967 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Viun9g02795 967 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Viun9g02795 967 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 327 626 - -
Viun9g02795 967 SMART LRR_typ_2 123 147 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 341 365 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 508 532 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 197 221 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 269 293 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 149 173 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 556 580 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 366 389 IPR003591 -
Viun9g02795 967 SMART LRR_typ_2 461 485 IPR003591 -
Viun9g02795 967 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 392 959 - -
Viun9g02795 967 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 31 147 - -
Viun9g02795 967 Gene3D Phosphorylase Kinase; domain 1 671 778 - -
Viun9g02795 967 FunFam Leucine-rich repeat receptor protein kinase EMS1 240 326 - -
Viun9g02795 967 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Viun9g02795 967 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 148 239 - -
Viun9g02795 967 SUPERFAMILY L domain-like 43 359 - -
Viun9g02795 967 Pfam Protein tyrosine and serine/threonine kinase 743 958 IPR001245 GO:0004672|GO:0006468
Viun9g02795 967 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 668 779 - -
Viun9g02795 967 Gene3D Transferase(Phosphotransferase) domain 1 779 966 - -
Viun9g02795 967 ProSiteProfiles Protein kinase domain profile. 704 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02795 967 SUPERFAMILY Protein kinase-like (PK-like) 706 963 IPR011009 -
Viun9g02795 967 PRINTS Leucine-rich repeat signature 508 521 - -
Viun9g02795 967 PRINTS Leucine-rich repeat signature 296 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02795 Viun-Chr9 36603910 36607879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02795 16 959 Receptor kinase-like Gene Family AT2G25790 51.620 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Viun9g02795 PK_Tyr_Ser-Thr 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02795 - - gmx:100777118 1598.95