Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02784 ATGTCGAGCATTTCCTTGAAGGAGAACGGTGGTGAGGTTTCTGTCACGAAGAATTATAGCAATGGTGGGGGTTTAAGGGACTTGTATGGTGAGGATAGTGCCACAGAGGACCATCTTATCACTCCATGGACCTTCTCTGTGGCCAGTGGATACAGTTTACTGAGAGATCCACGCTACAACAAAGGGCTGGCCTTTAGTGAGGGAGAGAGAGATGCTCATTACTTGCGTGGCCTTTTGCCCCCAGTTGTCTTCAATCAGGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTCCATAGGTACATGGCCCTGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTCTACAGGCTTCTGATGGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACGGTTGGAGAAGCATGCCAGAAATACGGAAGCATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAAAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACCGATGGTGAGCGCATATTAGGACTTGGAGATCTTGGCTGCCAGGGAATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACTGCTTTAGGAGGTGTTCGTCCTTCGTCTTGTTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGGCTTAGACAAAGGCGTGCAACTGGGAAGGAATATGCAGAGCTTCTAGACGAGTTTATGCGCGCAGTTAAGCAGAACTATGGAGAGAAAGTTCTCATACAGTTTGAGGATTTCGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGTTCATCTCATCTTGTTTTTAACGATGATATCCAGGGTACAGCATCTGTTGTGCTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGAACCTTAGCTGACCACACCTTCTTGTTCTTGGGTGCTGGAGAGGCTGGAACTGGTATAGCAGAACTGATTGCTCTTGAGATTTCAAAGCAGACAAAAGCTCCAGTGGAAGAGACCAGAAAGAAGATCTGGCTTGTGGATTCAAAGGGACTTATTGTTAGCTCTCGTCTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCACATGAGCATGAACCTGTGAAGGGGCTACTAGATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGTAGGGAAGACATTTACCAAGGAAGTGGTTGAAACCATGGCATCCTTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACAGCTGAAGAAGCTTACACATGGAGCAAGGGTAAAGCGATCTTTGCCAGTGGAAGCCCTTTTGATCCTGTTGAATATGAAGGAAAACTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATCTCTGGTGCAATCCGTGTGCGTGATGAGATGCTCCTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCAGAGGAGAACTATGATAAGGGACTGATTTACCCTCCATTCTCAAACATTAGGAAGATATCAGCACACATTGCTGCTAAAGTGGCGGCTAAGACATATGATCTAGGTCTGGCTTCTCATCTACCTCGACCAAAGGATCTTGTTAAATATGCAGAGAGTTGCATGTACAGCCCAGGCTACCGAAGCTACCGTTGA 1770 0.4537 MSSISLKENGGEVSVTKNYSNGGGLRDLYGEDSATEDHLITPWTFSVASGYSLLRDPRYNKGLAFSEGERDAHYLRGLLPPVVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYRLLMDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQRRATGKEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKGLLDAVKAIKPTVLIGSSGVGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFSNIRKISAHIAAKVAAKTYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02784 589 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 304 IPR046346 -
Viun9g02784 589 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 305 588 IPR036291 -
Viun9g02784 589 ProSitePatterns Malic enzymes signature. 301 317 IPR015884 GO:0004471
Viun9g02784 589 Gene3D - 303 589 - -
Viun9g02784 589 SMART Malic_M_2 305 558 IPR012302 GO:0051287
Viun9g02784 589 CDD NAD_bind_1_malic_enz 305 583 - -
Viun9g02784 589 SMART malic_2 114 295 IPR012301 GO:0004471
Viun9g02784 589 Pfam Malic enzyme, NAD binding domain 305 556 IPR012302 GO:0051287
Viun9g02784 589 PANTHER MALIC ENZYME-RELATED 25 589 - -
Viun9g02784 589 FunFam Malic enzyme 303 589 - -
Viun9g02784 589 Pfam Malic enzyme, N-terminal domain 114 294 IPR012301 GO:0004471
Viun9g02784 589 Gene3D - 48 302 IPR037062 GO:0004471
Viun9g02784 589 PIRSF ME 14 589 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 FunFam Malic enzyme 48 302 - -
Viun9g02784 589 PRINTS Malic enzyme signature 120 144 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 216 238 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 276 294 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 435 451 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 332 348 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 301 317 IPR001891 GO:0004470|GO:0004471
Viun9g02784 589 PRINTS Malic enzyme signature 180 209 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02784 Viun-Chr9 36517868 36522389 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02784 K00029 - gmx:100818219 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02784 9 36517868 36522389 Viun9g02784 9 36517868 36522389 ECH
Viun9g02784 9 36517868 36522389 Viun10g02618 10 39752376 39757458 ECH
Viun9g02784 9 36517868 36522389 Viun5g03858 5 47025313 47030587 ECH
Viun3g00317 3 1848041 1853141 Viun9g02784 9 36517868 36522389 ECH
Viun10g02618 10 39752376 39757458 Viun9g02784 9 36517868 36522389 ECH
Viun5g03858 5 47025313 47030587 Viun9g02784 9 36517868 36522389 ECH