Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02774 ATGTCCAAAGTGCCCCTCTTCATTTTCTTTCGTTTGTTTCTGACATTCAGCGTCGCTGTACCCTCTCGGGTAATTTCAGAAACTGAACAAACAATCCTACTCACTCTCAAACGTGAACTGGGAGACCCACCGTCGCTCCGATCATGGAAACCGTCGCCGTCTGCGCCGTGCGACTGGACGGAGATTGGCTGCAGCGGCAGCGGCGGTGCCGTCACGAAGCTAGTCCTCGCCAGCAAAGGCATCACCACCACCAAGAGCCTCCCTTCCACAATATGCAACCTCAAACACCTACTCGAGCTTAACCTCTTCAACAACTCCATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCGGTACCTCAACCTGTCGCAGAACTACCTCTCCGGAGCGATCCCCGCCGACGTGGACCGCCTCAAAAACCTTACTTTTCTCGACCTCACAGCCAACTCCTTCTCCGGAGAGATCCCGGCGGCGATCGGGAACCTGCGGGAACTGCAAACGCTGCATCTTTCCGCAAACAACTTCGAGGGAACTGTCCCCAAGGAAATCGGAAACTTGTCGAACCTCGAATTCTTAGGTTTGGCTTATAATCTCAAACTCGCGCCGTGGGAGTTCCCGTTGGAGTTTAGGAAATTAAGAAAATTGAAGTCTTTGTATATGCCGCAGTGTAACTTGATCGGAGAGATTCCAGAATATTTCGGGGATATTTTCACGAACCTCGAACGGTTGGATTTGGGGAAGAACAAGTTATCGGGGAGCATTCCGAGGAATTTGTTCTCGCTGAGGAAGTTGGGGTTCTTGTACCTGTTCAGTAACAGATTGTCGGGTGTGATTCCTAGTGCTACGATGCAGTGTTTGGAATTAATCGACCTTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCCCCAGAGTTTGGAAAGTTAAAGAACTTGAGTACCTTGCACTTGTATGAGAATCACTTGTTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTAGTCTTATCTATTTCAGGGTTTTCAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCAAAGCTCACAGTGTTTGAGGTTTCTGAGAACCAACTCAGCGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCCCTTATTGGTGTGGTTGCATTCTCCAACAATTTTAGTGGGATTTTGCCTGAGTGGATTGGGAATTGTCCTTCTCTCGCCACGGTTCAGCTTTATAATAACAAGTTTTCGGGTGAGATTCCTTTGGGTTTGTGGACTATGAATAACCTTTCATCGTTGATTTTGAGCAACAACTCCTTTTCTGGGCCTCTTCCGAGTCAAGTGTTTTGGAATATGACGAGGATTGAGATCGCCAACAACAACTTCTCAGGGGGGATATCCGTTGGGATTACTTCAGCCAAAAATCTTATGTTTCTTGATGCCAGAAACAACATGCTTTCGGGTGAAATTCCAAGGGAATTGACTCAACTTTCTCAGCTTACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCGCTTCCATCTGAGATTATTTCATGGCAATCACTGAACATTTTGACACTATCACGAAACAAACTTTCTGGTGAGATTCCCACAGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTGTCAAAATTCCATATCAGGTGAAATACCTCCTCAGTTTGATAGGTTGCGGTTTGTTTTCCTCAACTTGTCCTCCAACCAGCTATCTGGGAAAATCCCTGATGAGTTCAACAACCTCGCATTTGAAAACAGTTTCTTGAACAATCCTCTTCTATGCGCTTACAATCCAAACGTCCACCTTGACAACTGCTTCGCCAAAACCGTGTCAGCGGCGCCACAGTCGAGCAATTCGTCTTCGAAATCACTGGCCCTGGTTCTGGCCGCCACCGCCGTTGTGCTAGTGGCAATAGCTTCCTTGGTATTCTATACGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCAAAAGAATAAGGTTGCGACGTGGAGGCTGACTTCATTCCAGAGGGTTGATCTCACGGAAATAAACTTCCTCTCGAGTTTGACGGACAATAACCTGATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGAATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGCAGATCTGGAATCGCGAGGATGTGGATGACAAGTTGGAGAAAGAGTTCCAGGCTGAGGTTGAGATCCTGGGCAACATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGGAAAAAAAATCGCCTCCTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGTCTGTGTTACATGCACCATGAATGCTCACCACCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCGGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGCCCGGTGAACTAAACACCATGTCTGCTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCTTATTCAACTAAGATTAACGAGAAAGTTGATGTTTATAGCTTTGGTGTTGTGCTCTTAGAGCTTGTTACGGGAAGGAAGCCTAATATAAGCGGCGAGCGTGAATGCAGCTTAGTCGAATGGGCGTGGGAGCATTTTAATGAAGCCAAGAGCCTTACTGATGCATTCGATGAGGATATCAAAGAACCACGTTATGCGGAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAGCCTCCTTGCCCTCAACTAGACCTTCCACGAAGGAGATTTTGCAAGTGCTTCGGTGTTGTCATTCAGGTTCTACACGTAGAAGAATGGGAAATGAGTTTGATATCGCTCCTCTACTTGGTGACACAAGGTACGTTTGCAGTTACAAGGAGAGTAATGCTGCAACCAATAACTCATCTTGA 3057 0.4701 MSKVPLFIFFRLFLTFSVAVPSRVISETEQTILLTLKRELGDPPSLRSWKPSPSAPCDWTEIGCSGSGGAVTKLVLASKGITTTKSLPSTICNLKHLLELNLFNNSIAGEFPTTLYECSNLRYLNLSQNYLSGAIPADVDRLKNLTFLDLTANSFSGEIPAAIGNLRELQTLHLSANNFEGTVPKEIGNLSNLEFLGLAYNLKLAPWEFPLEFRKLRKLKSLYMPQCNLIGEIPEYFGDIFTNLERLDLGKNKLSGSIPRNLFSLRKLGFLYLFSNRLSGVIPSATMQCLELIDLDFAKNNLTGSIPPEFGKLKNLSTLHLYENHLFGEIPVSLSQIPSLIYFRVFSNNLSGTLPPELGLHSKLTVFEVSENQLSGGLPEHLCAGGALIGVVAFSNNFSGILPEWIGNCPSLATVQLYNNKFSGEIPLGLWTMNNLSSLILSNNSFSGPLPSQVFWNMTRIEIANNNFSGGISVGITSAKNLMFLDARNNMLSGEIPRELTQLSQLTALMLDGNQLSGALPSEIISWQSLNILTLSRNKLSGEIPTAITALPRLAYLDLCQNSISGEIPPQFDRLRFVFLNLSSNQLSGKIPDEFNNLAFENSFLNNPLLCAYNPNVHLDNCFAKTVSAAPQSSNSSSKSLALVLAATAVVLVAIASLVFYTLKTQWGKKHCGQKNKVATWRLTSFQRVDLTEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKQIWNREDVDDKLEKEFQAEVEILGNIRHSNIVKLLCCYASENSKLLVYEYMENQSLDKWLHAEEKKSPPGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLAKPGELNTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNISGERECSLVEWAWEHFNEAKSLTDAFDEDIKEPRYAEEMANVFKLGLLCTASLPSTRPSTKEILQVLRCCHSGSTRRRMGNEFDIAPLLGDTRYVCSYKESNAATNNSS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02774 1018 SMART serkin_6 700 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02774 1018 SUPERFAMILY Protein kinase-like (PK-like) 694 976 IPR011009 -
Viun9g02774 1018 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Viun9g02774 1018 ProSiteProfiles Protein kinase domain profile. 700 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02774 1018 SMART LRR_typ_2 433 457 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 166 190 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 503 527 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 551 574 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 313 337 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 241 265 IPR003591 -
Viun9g02774 1018 SMART LRR_typ_2 94 118 IPR003591 -
Viun9g02774 1018 Gene3D Phosphorylase Kinase; domain 1 682 779 - -
Viun9g02774 1018 Pfam Protein kinase domain 702 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02774 1018 SUPERFAMILY L domain-like 395 613 - -
Viun9g02774 1018 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Viun9g02774 1018 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Viun9g02774 1018 Gene3D Transferase(Phosphotransferase) domain 1 780 994 - -
Viun9g02774 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 284 382 - -
Viun9g02774 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 282 - -
Viun9g02774 1018 FunFam Receptor-like protein kinase HSL1 680 779 - -
Viun9g02774 1018 CDD STKc_IRAK 706 976 - -
Viun9g02774 1018 Gene3D Ribonuclease Inhibitor 289 387 IPR032675 -
Viun9g02774 1018 Gene3D Ribonuclease Inhibitor 183 288 IPR032675 -
Viun9g02774 1018 SUPERFAMILY L domain-like 33 378 - -
Viun9g02774 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 386 625 - -
Viun9g02774 1018 Gene3D Ribonuclease Inhibitor 391 628 IPR032675 -
Viun9g02774 1018 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Viun9g02774 1018 FunFam Receptor-like protein kinase HSL1 isoform A 26 181 - -
Viun9g02774 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Viun9g02774 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 780 991 - -
Viun9g02774 1018 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 971 - -
Viun9g02774 1018 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02774 Viun-Chr9 36463415 36467371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02774 18 998 Receptor kinase-like Gene Family AT5G25930 52.381 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun9g02774 Pkinase 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02774 - K00924 gmx:100782466 1544.25