Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02769 ATGGCCATCGCAACAGAGACTCAGCCTCAACAACACAAGGATTCTTCCGAGGTGTTGGGTTCAGCTGCGGGGAAGAGGTGGACGCTGAACGATTTCGACATTGGAAAACCTCTTGGAAGGGGAAAATTCGGCCACGTCTATTTGGCAAGGGAGAAGAGTAGTAATCACATTGTTGCTTTGAAAGTACTCTTTAAGAGCCAATTGCAGCAATCCCAAGTTGTGCATCAACTGCGGCGAGAAGTCGAGATTCAAAGTCATCTTCGACATCCCCACATCTTGCGCCTCTATGGATACTTTTATGACCAGAAAAGAGTGTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTGCAAAAATGCAAGTATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCGTCATTGGCCAAGGCCCTAATATATTGCCATGGAAAACATGTAATCCACAGGGATATTAAACCCGAAAACCTTCTTGTTGGTGCACAGGGTGAGCTAAAAATAGCGGACTTTGGGTGGTCAGTGCACACATTTAATCGCAGACGGACAATGTGTGGCACACTGGATTACCTTCCTCCCGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTGCTGTGTTATGAGTTTCTTTATGGGGTCCCTCCCTTTGAGGCTAAAGAACACTCGGATACTTACAGGAGGATTGTACATGTGGATCTTAAGTTCCCTCCTAAACCAATTGTATCCTCTGGTGCAAAGGATCTTATCAGTCAGATGCTTGTCAAGGATTCATCGCAACGGTTACCATTGCACAAACTCCTTGAACACCCTTGGATTGTTCAGAATGCAGAGTCCTCGGGTGTATATAGGGGCTAG 888 0.455 MAIATETQPQQHKDSSEVLGSAAGKRWTLNDFDIGKPLGRGKFGHVYLAREKSSNHIVALKVLFKSQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLAKALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVHVDLKFPPKPIVSSGAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAESSGVYRG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02769 295 ProSiteProfiles Protein kinase domain profile. 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02769 295 CDD STKc_Aurora 31 284 - -
Viun9g02769 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Viun9g02769 295 Gene3D Transferase(Phosphotransferase) domain 1 116 292 - -
Viun9g02769 295 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 15 293 IPR030616 GO:0004672
Viun9g02769 295 SMART serkin_6 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02769 295 FunFam serine/threonine-protein kinase Aurora-1 116 291 - -
Viun9g02769 295 PIRSF ILK 2 280 - -
Viun9g02769 295 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Viun9g02769 295 Pfam Protein kinase domain 34 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02769 295 SUPERFAMILY Protein kinase-like (PK-like) 23 286 IPR011009 -
Viun9g02769 295 Gene3D Phosphorylase Kinase; domain 1 21 115 - -
Viun9g02769 295 FunFam Aurora kinase A 24 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02769 Viun-Chr9 36441371 36444203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02769 32 292 EF-hand Containing Proteins AT5G12180 37.132 2.64e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Viun9g02769 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02769 K08850 - gmx:100775451 571.237