Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02737 ATGAACCACCATCCCTTCATCACCCTCTTCTCTACTATACTAATCGTTTCCACCACCACCCTATCACTCTCCCAGGTTATCATCACCAGTGGCACCACCAACAACCACTCACAGTTTTTCTTTCTCATGAAACTCTCTCTCTCCGGGAAGTACCCCATGAATTGGGACGCCGGAAAACCCGTGTGCAGCTTCACCGGAGTTACCTGCAACACCGAAGGTGACGTTATCAGCCTCGACCTTTCAGGTTGGTCATCACTTACCGGAAAGTTCCCGGCAGATACATGCTCTTACCTCCCACAGTTACGTGTTCTCCGCCTCGGCCACACCAGGTTCAAGTTCAACGTAGACACAATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTCCCAGACCGGCACGCTCCCAGATTTCTCTTCCCTGAAATCTCTAAGGATTCTCGACTTGTCCTACAACTCCTTCACCGGCCAGTTCCCCATGTCAGTGTTCAACCTCACCAACCTCGAGGTGCTAAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGCTACCTGCAGATATTGACAGGTTGAAAAACCTCAAGTCCATGGTGCTCACCACGTGCATGGTGCATGGTCAAATCCCTGCGTCCATAGGGAACATAACTTCCCTCATCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCGAAAGAGCTTGGTCAGCTGAAGAACCTCCGACAGCTTGAGCTTTACTATAACTACCATCTCGTTGGGAACATTCCGGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCAGTGAACAAGTTTACCGGGAGCATCCCTGAATCGGTGTGTAGGCTCCCCAAGCTTCAGGTCTTGCAGCTCTACAACAACAGCCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTAAGAATGCTGTCTCTGTACGACAACTTCCTTGTAGGACAGGTTCCCAAGAAACTGGGACAGTTCTCTGGAATGTTACTTCTTGACTTGTCGGAGAATAAATTTTCTGGTCCGTTGCCAACCGAGGTTTGCAAGGGTGGTACGCTAGAGTACTTTCTCGTTCTGGATAACATGTTTTCCGGAGAGATACCACAGAGTTATGCCAACTGCATGATGCTGTTGAGGTTTAGAGTGAGTAACAACCGTTTGGAGGGTTCCATTCCCGCGGGACTCCTTGGTTTACCACACGTTTCAATCATTGATGTCAGTAACAATAACTTGAATGGTCCAATTCCTGAGATTAACGGGAATTCTAGAAACCTGTCTGAACTGTTCCTTCAGAGGAACAAAATTTCAGGTGTCATAACTCCCACAATATCTCGAGCCATTAGTCTGGTCAAAATAGATTTCAGTTACAACCTTCTATCTGGTCCAATCCCTTCCGAAATAGGCAACCTCAGAAGGCTCAATTTGCTTATGTTGCAAGGGAACAAGCTGAATTCTTCCATCCCCGGTTCACTCTCTTCATTGGGGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTCTAACTGGGAGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCGCACAACATGCTTTCGGGTCCAATTCCTCCCAAACTGGTCAAAGGAGGGTTGGTGGAAAGTTTTGCAGGGAATCCTGGTTTGTGTGTTCTACCGGTGTATGCTAATTCATCGGATCGAAACTTCCCTATATGTGCAAGTGCCTACAAGAACAAGAGGATCAACACCATCTGGATAGCTGGGGTGTCAGTGGTTTTGATCTTTATTGGGTCTGCCTTGTTTCTCAAACGTAGGTGCAGCAAAGACACCGCTGCAGTGGAACATGAGGAGACACTGTCTTCATCGGTTTTCTCTTATGACGTTAAGAGCTTCCACAAGATCTCGTTCGACCAAAGGGAGATCGTTGAGTCCTTGGTGGACAAGAACATAATGGGGCATGGAGGGTCCGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTCGCAGTGAAGAGGCTGTGGAGTCGCAAGTCCAAGGATTCGACTCCAGAGGATCGGTTGTTTGTAGACAAGGCATTGAAGGCAGAGGTGGAGACCTTAGGAAGCATAAGGCACAAGAACATAGTGAAACTATACTGCTGCTTCTCCAGTTTTGACTGCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAACCTTTGGGATTCCCTGCACAAGGGTTGGACCCTTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGAATTGCACAGGGTTTATCGTACCTTCACCATGATTTGCTTCTTCCTATTATCCATCGAGACATCAAGTCAACCAATATCCTGTTGGATGTCGATTACCAACCCAGGGTTGCAGATTTTGGAATTGCCAAGGTTTTGCAAGCAAGAGGAGTGAAGGATTCCACCACAACTGTCATTGCAGGAACATACGGTTACTTAGCCCCAGAATTTGCATATTCATCGAGGGCCACCACCAAGTGCGACGTGTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACCGGGAAGAAGCCCGTGGAGGCAGAGTTTGGAGAGAACAGAAACATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAGGGGGCAAGACCAAGCGAAGTTTTTGATCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTGTTGCGGGTTGCCATTCGCTGCACCTACAAGGCCCCAACAAGTAGACCAACCATGAAAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCAACCAAAGATGTTTCAAATGTAAAGAAACCATATGAATTATAA 2892 0.471 MNHHPFITLFSTILIVSTTTLSLSQVIITSGTTNNHSQFFFLMKLSLSGKYPMNWDAGKPVCSFTGVTCNTEGDVISLDLSGWSSLTGKFPADTCSYLPQLRVLRLGHTRFKFNVDTILNCSHLEELNMNHMSQTGTLPDFSSLKSLRILDLSYNSFTGQFPMSVFNLTNLEVLNFNENGGFNLWQLPADIDRLKNLKSMVLTTCMVHGQIPASIGNITSLIDLELSGNFLTGQIPKELGQLKNLRQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPESVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGQVPKKLGQFSGMLLLDLSENKFSGPLPTEVCKGGTLEYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPAGLLGLPHVSIIDVSNNNLNGPIPEINGNSRNLSELFLQRNKISGVITPTISRAISLVKIDFSYNLLSGPIPSEIGNLRRLNLLMLQGNKLNSSIPGSLSSLGSLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNMLSGPIPPKLVKGGLVESFAGNPGLCVLPVYANSSDRNFPICASAYKNKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEETLSSSVFSYDVKSFHKISFDQREIVESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSFDCSLLVYEYMPNGNLWDSLHKGWTLLDWPTRYRIALGIAQGLSYLHHDLLLPIIHRDIKSTNILLDVDYQPRVADFGIAKVLQARGVKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRVAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVKKPYEL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02737 963 Gene3D Phosphorylase Kinase; domain 1 639 740 - -
Viun9g02737 963 Gene3D Ribonuclease Inhibitor 292 577 IPR032675 -
Viun9g02737 963 SUPERFAMILY RNI-like 75 309 - -
Viun9g02737 963 SUPERFAMILY Protein kinase-like (PK-like) 642 936 IPR011009 -
Viun9g02737 963 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 741 954 - -
Viun9g02737 963 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 43 229 - -
Viun9g02737 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Viun9g02737 963 Gene3D Ribonuclease Inhibitor 185 287 IPR032675 -
Viun9g02737 963 FunFam Leucine-rich repeat receptor-like protein kinase 184 287 - -
Viun9g02737 963 SUPERFAMILY L domain-like 253 570 - -
Viun9g02737 963 SMART LRR_typ_2 507 531 IPR003591 -
Viun9g02737 963 SMART LRR_typ_2 483 506 IPR003591 -
Viun9g02737 963 SMART LRR_typ_2 168 194 IPR003591 -
Viun9g02737 963 SMART LRR_typ_2 98 121 IPR003591 -
Viun9g02737 963 SMART LRR_typ_2 218 242 IPR003591 -
Viun9g02737 963 SMART LRR_typ_2 291 315 IPR003591 -
Viun9g02737 963 Pfam Protein kinase domain 658 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02737 963 Gene3D Transferase(Phosphotransferase) domain 1 741 958 - -
Viun9g02737 963 FunFam receptor protein-tyrosine kinase CEPR1 639 740 - -
Viun9g02737 963 Gene3D Ribonuclease Inhibitor 40 184 IPR032675 -
Viun9g02737 963 ProSiteProfiles Protein kinase domain profile. 656 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02737 963 FunFam Receptor protein-tyrosine kinase CEPR1 291 577 - -
Viun9g02737 963 MobiDBLite consensus disorder prediction 944 963 - -
Viun9g02737 963 SMART serkin_6 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02737 Viun-Chr9 36195795 36199695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02737 32 943 Receptor kinase-like Gene Family AT5G49660 64.744 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun9g02737 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02737 - - gmx:100785822 1694.86