Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02733 ATGGCGAATCAAGAAACTCAGCAGGGCCGTCCCCGGCAACAACGCCGGTCCAAGGATCGACCGGTGGTCCCGGCTAGGGTTCCGTTGAGGCTGTTGCTTCGGGTAGCGTCGGTTGCCGGAGGCATTCAGTTTGGGTGGGCATTGCAGCTCTCGCTTCTGACGCCGTACGTGCAGCAGTTGGGGATCCCGCACGTGTGGGCCAGCATCATATGGCTCTGTGGGCCGCTCTCTGGGCTGCTGGTCCAGCCCCTCGTGGGCCACTTGAGCGACCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGGCGGAGCATTGGCGATCATCGCTGCTGTTCTGGTCATCGGTCACTCCGCGGACATCGGGTGGTGGTTCGGCGACACGCCCCATCATCGCCCCTGGGCTGTGGGCGTTTTCGTTTTCGGGTTTTGGATTTTGGACGTGGCTAACAACGTCACTCAGGGGCCCTGCAGAGCTTTGCTTGGTGATCTCACTGGTAAGGATCACCGAAGGACTCGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAATATTCTTGGATATGCAGCTGGGTCATACAGTGGTTGGTACAGGGTCTTTCCTTTCACCATGACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTATCTTGATGTTGGTTTCATCGCTGTCACCACTTATATAAGCATCATGGCAGCTCATGAAGTGCCTCTGAGTTCTAGTAGGGCACAACCTGTTGAAGCAGCAGCAGGGGAATCGGGTGTTGCTGGAGAAGCTTTTCTGTGGGAGTTATTCGGGACAGTCAGATATTTTTCAACCCCAGTATGGACAATACTATCTGCTACTGCCTTAACTTGGATTGGATGGTTTCCATTTCTCCTTTTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAACCAAATGAAGGCCCTAATTATGATATTGGAGTTAGAATGGGGGCAATGGGCTTACTGCTTAATTCAGTTGTTCTTGGAATAACATCTGTACTCATGGAGAGGTTATGCAGGAACCGGGGGGCTGGGTTTGTGTGGGGAATCTCAAATATCTTGATGGCTGTCTGCTTTGTTGCAATGCTTATTGTAACCTATCTGGCAAATAGAATTGGCTATATAGGCAAAGAACTACCACCAACTGGCATTGTGATAGCTGCATTGACAATCTTTACCGTTCTTGGGTTTCCACTTGCAATCACTTACAGCGTTCCATATGCCTTAATTTCCACACATACTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGGGTCCTAAATCTTGCAATAGTGCTCCCGCAGATGGTGGTGTCCCTGGGAAGTGGACCGTGGGATCAGCTATTTGGTGGAGGAAACTCTCCGGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTCTCAGTGGATTCATAGGTATCTTGGCTATTCCCCGATCTGGCGGTCAAAAGTCTACAAGCCAAGCATGA 1509 0.5123 MANQETQQGRPRQQRRSKDRPVVPARVPLRLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHVWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGALAIIAAVLVIGHSADIGWWFGDTPHHRPWAVGVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYAAGSYSGWYRVFPFTMTPACNISCANLKSAFYLDVGFIAVTTYISIMAAHEVPLSSSRAQPVEAAAGESGVAGEAFLWELFGTVRYFSTPVWTILSATALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDIGVRMGAMGLLLNSVVLGITSVLMERLCRNRGAGFVWGISNILMAVCFVAMLIVTYLANRIGYIGKELPPTGIVIAALTIFTVLGFPLAITYSVPYALISTHTQSLGLGQGLSMGVLNLAIVLPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALLSGFIGILAIPRSGGQKSTSQA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02733 502 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g02733 502 Pfam MFS/sugar transport protein 47 193 - -
Viun9g02733 502 Gene3D MFS general substrate transporter like domains 29 486 IPR036259 -
Viun9g02733 502 PANTHER SUGAR TRANSPORTER 28 486 - -
Viun9g02733 502 NCBIfam sucrose/proton symporter 27 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun9g02733 502 FunFam Sucrose transport protein 26 490 - -
Viun9g02733 502 SUPERFAMILY MFS general substrate transporter 30 495 IPR036259 -
Viun9g02733 502 CDD MFS_SLC45_SUC 32 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02733 Viun-Chr9 36141015 36154532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02733 3 497 Sucrose Transporter Gene Family AT1G09960 68.463 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02733 K15378 - gmx:100787939 852.818