Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02721 ATGGAGCACTATGACCATGATTTCTTGGAGGAACTGATGACTCTAAGAAGAGAAACATGGGACACCACCAATCCAAGTACAGAAGAAACCCAGTTCTTCTGTAATGGCTGGAGTAGTTTTGATTGTTTTGATCAAAACTCTCTACCTTACCTCCCCAACTCTTCTTCTGCTCAAGAAGTTCCTCAAAGCTACAACGACTACCACCCCTTCAATGAAATCTATGGCTCTTTACTCGATGAATCCTCACCGCAGATTATCGATTCTTACTACAGTACTACCCTTGATACTCCACTCAACACCCTTGGTCAAGAGGATTATCCATTGTCCATTATGGAAGAAGAAGACCCCGGTATGCTCGGGGAAGAGCTTAAGAATTTGGAGCTGCAAACTACATGCAAAGCTGAGCCAACCCAGTCCTCTGAAATGCCAGTTTTCAACATCGGAACGGGTCTGGAAAGAAAGAATCGGTCAAAGAAGCTTCAGGGGCAACCCTCCAAGAATCTAATGGCGGAGAGGAGAAGAAGAAAGAGACTAAATGACAGGCTCTCAATGCTGAGAGCTATTGTTCCCAAGATAAGTAAGATGGATAGAACATCTATACTTGGGGACACCATTGATTACATGAAAGAACTTCTGGAGAAGATCAACAATCTTCAACAAGAAGTAGAAGTGGATTCTAAAATGGTAGGCATTTTCAAAGATGTGAAGCCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAAGTGGAGAGGACTTCAGACACACGGGTGGAAATTTGCTGTGCAGGAAAACCAGGATTGTTACAATCAACAGTAAACACCCTGGAAGCCTTAGGCCTTGAGATTCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAGGCTTCATGCTCAGAGGAATCGGAGCAAAGTGCAATGCTGAGTTCTGAAGATATAAAGCAAGCGTTGTATAGAAGTGCAGGATATGGAGGAAGGTGTTTGTGA 993 0.427 MEHYDHDFLEELMTLRRETWDTTNPSTEETQFFCNGWSSFDCFDQNSLPYLPNSSSAQEVPQSYNDYHPFNEIYGSLLDESSPQIIDSYYSTTLDTPLNTLGQEDYPLSIMEEEDPGMLGEELKNLELQTTCKAEPTQSSEMPVFNIGTGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQEVEVDSKMVGIFKDVKPNEILVRNSPKFEVERTSDTRVEICCAGKPGLLQSTVNTLEALGLEIQQCVISCFNDFTMQASCSEESEQSAMLSSEDIKQALYRSAGYGGRCL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02721 330 Coils Coil 201 228 - -
Viun9g02721 330 CDD ACT_UUR-ACR-like 256 297 - -
Viun9g02721 330 SMART finulus 168 217 IPR011598 GO:0046983
Viun9g02721 330 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 62 324 - -
Viun9g02721 330 Gene3D - 152 226 IPR036638 GO:0046983
Viun9g02721 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Viun9g02721 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 224 IPR036638 GO:0046983
Viun9g02721 330 Pfam Helix-loop-helix DNA-binding domain 168 211 IPR011598 GO:0046983
Viun9g02721 330 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02721 Viun-Chr9 35997700 35999728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02721 147 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.138 1.76e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun9g02721 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02721 - - gmx:100812578 559.681