Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02701 ATGAAAGGAGAATACGTAGACCAACAACAACATCCTAAGAATGAAACACCACCTCCTATCTTCTCAAAGCTTCAACCTCATCATCAACACCATCCTTTCCCGCACAACCCCTTCCAACTCTCCGCCGCCGACGAAGACAACCGCACCCTCGCCGTCACACCCACTACTGCACACAAGCCCAACTCCTCCGGGGGTGATGGGGCCACCATCGAGGTCGTTCGCCGTCCCAGGGGCCGTCCCCCCGGCTCCAAGAACAAGCCCAAGCCACCGGTAATCATAACCCGAGACCCCGAACCTGCTATGAGCCCCTACATTTTAGAAGTGTCCGGAGGCAGCGACGTCGTCGAGGCCATCGCGCAGTTCAGTCGCCGCAAGAATATGGGCATCTGTGTCCTCACCGGTTCCGGGACTGTTGCCAGCGTCACGCTCCGTCAACCCTCCACTACCCCCGGCGCCACTGTTACTTTTCAGGGCCGTTTCGATATCCTCTCCGTCTCCGCCACCTTCCTTCCGCAGCAATCCGGCGCGTCTCCCGCGGTGCCCAACGGCTTCGCCATCTCGCTCTCTGGCCCGCAGGGGCAGATCGTCGGGGGAATGGTCGCCGGCGGGTTGATGGCTGCGGGAACAGTGTTCGTGATCGCCGCTTCGTTCAACAACCCGGCGTATCATAGGCTGCCGCCGGAGGATGAGGGCGGCGCATCTGCAGGCGATGGACATTCGCCTCCAATATCTGGCGGCGGAGAAAGCGGGCATGGGCAGGCAGAATCATGTGGAATGTCCATGTACAGCTGTCACTTGCCTTCCGATGTGATTTGGGCTCCGACAGCTAGACCTCCACCGCCACCGCCACCTTACTGA 858 0.6026 MKGEYVDQQQHPKNETPPPIFSKLQPHHQHHPFPHNPFQLSAADEDNRTLAVTPTTAHKPNSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGSDVVEAIAQFSRRKNMGICVLTGSGTVASVTLRQPSTTPGATVTFQGRFDILSVSATFLPQQSGASPAVPNGFAISLSGPQGQIVGGMVAGGLMAAGTVFVIAASFNNPAYHRLPPEDEGGASAGDGHSPPISGGGESGHGQAESCGMSMYSCHLPSDVIWAPTARPPPPPPPY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02701 285 Gene3D - 102 235 - -
Viun9g02701 285 FunFam AT-hook motif nuclear-localized protein 102 236 - -
Viun9g02701 285 ProSiteProfiles PPC domain profile profile. 98 238 IPR005175 -
Viun9g02701 285 MobiDBLite consensus disorder prediction 1 97 - -
Viun9g02701 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 219 IPR005175 -
Viun9g02701 285 CDD DUF296 103 217 IPR005175 -
Viun9g02701 285 PIRSF ESCAROLA 8 272 IPR014476 GO:0003680
Viun9g02701 285 MobiDBLite consensus disorder prediction 224 258 - -
Viun9g02701 285 MobiDBLite consensus disorder prediction 42 63 - -
Viun9g02701 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 259 IPR014476 GO:0003680
Viun9g02701 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02701 Viun-Chr9 35873068 35874384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02701 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 59.044 2.77e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02701 - - gmx:100788098 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02701 9 35873068 35874384 Viun9g02701 9 35873068 35874384 ECH