Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02687 ATGGCACCCAGTTTTGACTGTGTTTCGAGTCTCCTTTGCTCAGAGGACAGCACCGTTTTCGACGAGAGCCATTACGGGGGTACGATGATGGGGGTGTGCGAGGACACGTGGCGGCCCCGGAGGCACCGCTTCGATGATGATGATGATGAACCGGATGAGTTGCCATTGCTGAGTGATGAGTGCTTGGCGATGATGGTGGAAAGAGAGTGCCAACTCTGGCCTGGTTTGCGTTACTTCAATAGCCTTCAGACTGGAATTTTGGACTCTGGTGCCAGAAAAGAGGCCATTGATTGGATTCACAAGGTCCGATCGCATTTCGGTTTTGGTCCTCTCTGTGGATATCTATCTATAAATTACTTGGATCGGTTCCTTTCTGCATATGAATTACCAAAGGGAAGAGTTTGGACAATGCAATTGTTGGCTGTGGCGTGTTTATCTCTGGCAGCCAAAGTAGATGAGACAGAAGTCCCAGTGTCTCTTGATTTACAGGTGGGTGAATCAAAGTTTGTATTTGAGGCTAAGACCATACAGAGAATGGAGCTTCTAGTGCTAAGCACATTGAAGTGGAGAATGCAATCAATCACTCCTTTCACCTTCATTGATTACTTCCTCTGCAAGATCAATGGGGATCAGAGTCCATTGAAGTCTGCAATTATGCGATCTATCCAACTAATATCAAGCACTGCAATAGGAATTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCCATGAATGTCATGGGGGAAACCCAAACAGTTGACACAGGGAAAGCAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGACTGTTGAAGTGCATTAAAATGATGAAAGAGTTGTCATCAAACAGTGGCTCTGCAAAGGATTCAAGTGGTTCTGTGACTTGCCTACCCCAAAGCCCAATAGGTGTGCTAGATGCTTTGTGCTTCAGCCACAAAAGTGATGACACAAATGCTGCTTCATGTGCTAACTCTTCACATAGTACTCCTGATGCTAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCAGAGCTATTGTAG 1056 0.4536 MAPSFDCVSSLLCSEDSTVFDESHYGGTMMGVCEDTWRPRRHRFDDDDDEPDELPLLSDECLAMMVERECQLWPGLRYFNSLQTGILDSGARKEAIDWIHKVRSHFGFGPLCGYLSINYLDRFLSAYELPKGRVWTMQLLAVACLSLAAKVDETEVPVSLDLQVGESKFVFEAKTIQRMELLVLSTLKWRMQSITPFTFIDYFLCKINGDQSPLKSAIMRSIQLISSTAIGIDFLEFKPSEIAAAVAMNVMGETQTVDTGKAISVLIQHVEKERLLKCIKMMKELSSNSGSAKDSSGSVTCLPQSPIGVLDALCFSHKSDDTNAASCANSSHSTPDAKRRKLNKTCGAELL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02687 351 SUPERFAMILY Cyclin-like 176 285 IPR036915 -
Viun9g02687 351 FunFam D2/4-type cyclin 75 187 - -
Viun9g02687 351 SMART cyclin_7 97 185 IPR013763 -
Viun9g02687 351 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Viun9g02687 351 CDD CYCLIN_AtCycD-like_rpt2 194 282 - -
Viun9g02687 351 PANTHER CYCLINS 59 287 IPR039361 -
Viun9g02687 351 Gene3D - 63 281 - -
Viun9g02687 351 Pfam Cyclin, N-terminal domain 61 191 IPR006671 -
Viun9g02687 351 SMART Cyclin_C_2 194 305 IPR004367 -
Viun9g02687 351 SUPERFAMILY Cyclin-like 50 191 IPR036915 -
Viun9g02687 351 Gene3D - 75 192 - -
Viun9g02687 351 Pfam Cyclin, C-terminal domain 194 293 IPR004367 -
Viun9g02687 351 FunFam D6-type cyclin 188 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02687 Viun-Chr9 35745127 35747760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02687 65 328 Core Cell Cycle Gene Families AT2G22490 48.897 4.10e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02687 K18810 - gmx:547739 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02687 9 35745127 35747760 Viun9g02687 9 35745127 35747760 ECH