LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g02686	ATGAAAGAAGATTGTGGAACCTGGATACCAAATCTGCAATTAGGATGGCAATCACCAAATTTGAATCCCCTTGATGTAGGGAAGCTAGGTGGTGTTTCTGCAGCCATGAACCCAGGCGTGAATATGATTTCTGCATATGAGACAATGCCAGCTTTTGCATCCTCTGCACTACAACCTCGTATGCAGTTAGGATGTTCCAGTGATCCGCGTGGTTGGTTTTATTGTTTGCCTCGCTTTCGACAAGAATTTACACCTGCTCCGAGCTTCACTGTTGAGGGAAAAACCCCTGTTGACCATGTGAAAGGTTTTGGGGACAAAATTGCTCCATTTGGCGAGTCTAGCTCGCCACGGAAACAATTTCTTGTCATTGACAAGACTGCTGGTCAAACAACTGTTGTTTATAGTTCTAGGTTTGGGAGTCCCTGCGAGTGCCTTGCTTCTTGGCATTCAAAACTACATGGTGGTAACAATTGGAGGGGTGATGAACCTTGTTTTAGAAGAAATTTGAATTTGAATCGTATGAGTGAGCCAACTTTGGCTGACAAGGTTCATGAGAATCATGAAACTAGCATTGAAAGCGAGATGCATGAAGACACAGAAGAAATTAATGCATTGCTTTACTCAGACAGTGATGACTATTCTTCCCATGACGATGATGATGATGATGATGATGATGATGATGATGATGAAGTTACAAGCACTGGGCACTCTCCTAGCACAATGACCACTCATGATGACTGCAAAACCTCTAGGGATGAAACTGTGAATGAAGTTGCAAGCTCTGCAAAGAAAACCAAGAAGAGGAAGCTATTGGATGGTTATTGTGAAGACATACAGCTCACTGATACTGCAAGTTCTCAGAATATGAACAAATCTTCGGCCACATGTGATGACTCAGAATCAAGATGTTCGAGTAACAACAATGGTGGATCCTTGTCTAGCAATAAGAAGATGAAAAAGGAGAAGATTCAAGATGTTCTCAGCATTCTGCAGAGCATAATTCCTGGAGGGAAAGATAAAGGCCCGGTTATGCTCCTCGATGATGCAATACGCAGCTTGAAATCATTGAAACAGAAGGCTCAGGCATTCGGACTTGATGCCTTGTAA	1107	0.4273	MKEDCGTWIPNLQLGWQSPNLNPLDVGKLGGVSAAMNPGVNMISAYETMPAFASSALQPRMQLGCSSDPRGWFYCLPRFRQEFTPAPSFTVEGKTPVDHVKGFGDKIAPFGESSSPRKQFLVIDKTAGQTTVVYSSRFGSPCECLASWHSKLHGGNNWRGDEPCFRRNLNLNRMSEPTLADKVHENHETSIESEMHEDTEEINALLYSDSDDYSSHDDDDDDDDDDDDDEVTSTGHSPSTMTTHDDCKTSRDETVNEVASSAKKTKKRKLLDGYCEDIQLTDTASSQNMNKSSATCDDSESRCSSNNNGGSLSSNKKMKKEKIQDVLSILQSIIPGGKDKGPVMLLDDAIRSLKSLKQKAQAFGLDAL	368

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Viun9g02686	368	MobiDBLite	consensus disorder prediction	245	263	-	-
Viun9g02686	368	MobiDBLite	consensus disorder prediction	286	318	-	-
Viun9g02686	368	MobiDBLite	consensus disorder prediction	178	203	-	-
Viun9g02686	368	MobiDBLite	consensus disorder prediction	213	231	-	-
Viun9g02686	368	MobiDBLite	consensus disorder prediction	286	314	-	-
Viun9g02686	368	MobiDBLite	consensus disorder prediction	176	263	-	-
Viun9g02686	368	PANTHER	TRANSCRIPTION FACTOR BHLH145	8	366	IPR037546	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g02686	Viun-Chr9	35728998	35732344	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun9g02686	108	358	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	35.659	1.21e-22	95.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g02686	-		-	pvu:PHAVU_009G038200g	605.52

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun8g01583	8	26499001	26502998	Viun9g02686	9	35728998	35732344	PCT

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