Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02683 ATGGGTTACCTCTCTTGCAATGCCCAATCCGCAATCGCCACCTGCGACCCTCACTTCAAGAAGCACAAACCCATCGCTGCCAAACCAATCCGCCACTTCAACTACGCCGAAATCGCCGCCGCGGCTTCCGGCTTCTCCGCCGAGACCTTCCTAGGCAGAGGCAGCCATGGCAGAGTGTACAAAGCTACCCTCGACGGCGGAAAGCTCCTTGCCGCCGTAAAAACCACGAAGCTCGTCTCTGCCTCGAAGAACCACTCCACTAAATGCACCGGCTGCGGCAACTGCACCAGTCCTGTGGAAAACGAGATCGAGATCCTCTCTCAAGTCCCGAGCCCCCGCGTGGTGAACCTCATCGGCTTCAGCACCGACCCAAACGGCAACAAACTAATCGTCGTTGAATACATGCCCAACGGTTCGCTCCACGATCTATTGCATTCCGTTAGAAAACCGCCCGGCTGGAACCGGAGGGTCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCGCGAATTGCACTCTGCCAACCCTCCCGTTATTCACCGCGACGTTAAGTCTTCCAATGTTTTAATTGACGAGAGATGGAACGCGAGGCTCGGTGACTTTGGCCTTGCGTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACGCCGCCCGCGGGGACGATAGGGTACCTCGACCCGTGCTATCTGGCGCCGGAGGATCTCAGCGCCAAGAGCGACGTTTTCAGCTTCGGGATCTTGCTGCTGGAGATCATCAGCGGCCGGAACGCCATCGACGTCAATTACAGCCCTTCCTCTATTGTGGACTGGGCGGTGCCGCTGATCAAGCTCGGCGACTTCGCCGGAATCTGCGACCGCCGGATCGGACCGCCGCCGGACCCCGCCGTGGTGCGGCAGCTCTCGGTGCTTGCTGCCAGATGCGTTAGATCGACGGCCGAGAAGCGGCCGTCCATGATGGAGGTGGTGGAGTGTCTGAATCTGGCAAGAAAGAGGATTCGCGCGTCCCCCGTGTGGATGTCTCTGCGGCGGCGCGTGGCGCGCATGGAGAGCGCGGTGCCGGTGGTGGCGTGGGAGGAGTGTGATGATAATAGTATTAATGATTGTGATAGGAGTGAGAAATTTGCGAGCATGGTGAAAGGTGGGAGTGGGAGCAGGAGGAAGGGAAAAGTATCCAGTGTGTGGGGTGTAGGGTATGGGAGTGAAGCCTCCAATAATCATAAAGTGATAAGGTCAAAATCCATTGGTTCTTCTTCTGGTTCCATCAGAGGTAGCTGGGTTAAAATGCAGCCACACCAAACCGAACACGGGTTTGGAAGGAGGAAGGTGAGGTTAAAAAAGTCAAAATCTTTGGGGGTTTTGCAAGGTTCTGTACTTTCACATTACACTGAGAATAGTAACAATAGGAGTTATAGTCACAGTTATAATAATAACAATAATAATGGTGATGATGTATCAGTAATTGTGTCTGCAATGGCGAAGTTGGTTGTTACAGATAAGCTAGAAAAGAAAATGGTGGAAAAACCGTTAGTGAAATTGCATGATGAGGTTGAGAGTGTGAGGATAGAGAATGAAGCAATGATTTGA 1584 0.5379 MGYLSCNAQSAIATCDPHFKKHKPIAAKPIRHFNYAEIAAAASGFSAETFLGRGSHGRVYKATLDGGKLLAAVKTTKLVSASKNHSTKCTGCGNCTSPVENEIEILSQVPSPRVVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHSVRKPPGWNRRVRFAVQVAKAVRELHSANPPVIHRDVKSSNVLIDERWNARLGDFGLALRGHVEDVRVKCTPPAGTIGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPSSIVDWAVPLIKLGDFAGICDRRIGPPPDPAVVRQLSVLAARCVRSTAEKRPSMMEVVECLNLARKRIRASPVWMSLRRRVARMESAVPVVAWEECDDNSINDCDRSEKFASMVKGGSGSRRKGKVSSVWGVGYGSEASNNHKVIRSKSIGSSSGSIRGSWVKMQPHQTEHGFGRRKVRLKKSKSLGVLQGSVLSHYTENSNNRSYSHSYNNNNNNGDDVSVIVSAMAKLVVTDKLEKKMVEKPLVKLHDEVESVRIENEAMI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02683 527 PANTHER OS01G0253100 PROTEIN 24 328 - -
Viun9g02683 527 ProSiteProfiles Protein kinase domain profile. 45 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02683 527 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Viun9g02683 527 SMART serkin_6 45 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02683 527 Pfam Protein kinase domain 48 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02683 527 SUPERFAMILY Protein kinase-like (PK-like) 30 348 IPR011009 -
Viun9g02683 527 Gene3D Phosphorylase Kinase; domain 1 16 134 - -
Viun9g02683 527 FunFam Serine/threonine-protein kinase-like protein 8 134 - -
Viun9g02683 527 Gene3D Transferase(Phosphotransferase) domain 1 135 338 - -
Viun9g02683 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Viun9g02683 527 FunFam Serine/threonine-protein kinase-like protein 135 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02683 Viun-Chr9 35699507 35701587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02683 31 336 Receptor kinase-like Gene Family AT3G59420 40.514 1.16e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun9g02683 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02683 - - gmx:100799382 763.837