Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02671 ATGTTGTGCTCACCGCGTAACCTTGGACTTCATTTCACTTCAATTGGACGGTCTCGCGACGTTAGGCTGTACAGTAATCATGGAAGCTGTTGCTTTTGTCAGTTGGGTAGTGGCATACCTACAATCATGAAGAGTTTGACAAGGAGAGCCATCATGAGGAGTCTGACAAGGAGATCGATTTCGACGATGGCAATGACCATGGACATGGTGGCAGTGTCAAGGTCATGTAATGCTATAGCAGGAAAACCAATCGCGATTCCAATAATCCCTGGCCTTGGTATTATTGGGTTTGCTGTTTTTGGTCTTGAGCCTCTTGGGCGCCTGGGCAGGAAGATGTTTCTCCAAGAAGGTACTGATAGAAGTTGGAAGAAAAGTAGTGCATATTATATTTTGACATCTTATTTTCAACCTATGCTGCTGTGGACTGGAGTGATGCTCATCTGCAGGGATTTAGATCCACTAGTCCTATCATCAGAAACTAGTCAGGCTATGAAGCAACGGCTGCTGAGTTTCGTAAGATCTTTGTCAACAGTGCTTACTATTGCTTACTGTTCTTCAAGCTTAATTCAACAGGCACAAAAATTATGTATGGAGGCAAATGACTCCAGTGATGAAAGAAATATGAGCATTGATTTTACTGGGAAAGCTGTATATACTGCAGTTTGGGTTGCTGCTGTGTCATTGTTCATGGAGTTACTGGGTATCTCCACACAGAAGTGGTTGACTGCGGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTTCTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAAGAATTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTATAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGTATAAAGACTCACCTGGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCCAAACATCCTCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTGGTGTCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTACGTGTAAAGGAGGTAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAAATGTACAGTGATACTGATTTCGATATTGATCCATTTGATGACACAGTTTCTTCTCGTTCCAGATCAACAAAAAACCGTCCTTTTGCACTGATAGATCCACCTTATAAAGTTAAACCTTCAACTCATTCAACTATTACAAATGAGGACAGAGATGGTAAGGTAGATGAAACCTTGCCATCTGACTTCAAAGTAGACTCTGATGAATTTTCTGTGACACCAAGTTCGGTCCAGAAGACCTCCAAATCCCAAAAGTCCAAAAAGTCAAAAACAACATCCAAAATTTTGTCAACATCCAATGAGTCTGGTTCTGGAGAGACTACTACACCATCAAAGCTAGATGATGAGAAATCTGATGTTTCCGAATCATCATCATCACCATCACTTGGTAATTCTTTGGAAGAGAATATTATTCTTGATGCTGCTTTGCTGGGCACAGAGAGAAGAACTATTGCAATTGATGAAGAATTGGTTGACTCTATCCCTTCAGAATCACAAGAAGTTGCAGCCCACCAGAATGGAAGTGAACTTCCAATTGGCAAGGATAAGAAGGATGAGCAGAATAGATGTTGA 1872 0.4097 MLCSPRNLGLHFTSIGRSRDVRLYSNHGSCCFCQLGSGIPTIMKSLTRRAIMRSLTRRSISTMAMTMDMVAVSRSCNAIAGKPIAIPIIPGLGIIGFAVFGLEPLGRLGRKMFLQEGTDRSWKKSSAYYILTSYFQPMLLWTGVMLICRDLDPLVLSSETSQAMKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKLCMEANDSSDERNMSIDFTGKAVYTAVWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVSGKVEHVGWWSPTRIRGSDCEAVHIPNHNLSINVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKHPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEVILLDLLRVISHHRARLATPIRTVQKMYSDTDFDIDPFDDTVSSRSRSTKNRPFALIDPPYKVKPSTHSTITNEDRDGKVDETLPSDFKVDSDEFSVTPSSVQKTSKSQKSKKSKTTSKILSTSNESGSGETTTPSKLDDEKSDVSESSSSPSLGNSLEENIILDAALLGTERRTIAIDEELVDSIPSESQEVAAHQNGSELPIGKDKKDEQNRC 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02671 623 MobiDBLite consensus disorder prediction 447 564 - -
Viun9g02671 623 MobiDBLite consensus disorder prediction 477 497 - -
Viun9g02671 623 Gene3D - 138 272 - -
Viun9g02671 623 Gene3D - 273 326 IPR023408 -
Viun9g02671 623 MobiDBLite consensus disorder prediction 523 542 - -
Viun9g02671 623 MobiDBLite consensus disorder prediction 501 515 - -
Viun9g02671 623 Pfam Mechanosensitive ion channel 215 422 IPR006685 GO:0016020|GO:0055085
Viun9g02671 623 SUPERFAMILY Sm-like ribonucleoproteins 258 328 IPR010920 -
Viun9g02671 623 MobiDBLite consensus disorder prediction 596 623 - -
Viun9g02671 623 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 39 620 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02671 Viun-Chr9 35592273 35604542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02671 70 622 Mechanosensitive Ion Channel Family AT5G10490 54.655 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02671 K22047 - gmx:100797302 847.04