Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02668 ATGTCGGTCTGTCCTAACACCGGGTGGAGGGAGTGGAACTCCTCTCATGAAATCTGCTGGTGTTATTTTAACAAGGTTGGCTTCTCTCTCCTTGTTAATTTAGAAAGGTTCCCCAAATTCAGTGGATATGTATGCTCATACCTGTCATATGATGCTTTACAAAGGAACCCTGTTTTGCTTCAATTGATCCCAGCCCTTGGCATCATTGCCTTTGCTGCTTGCGGTCTTGAGCCACTCATTCGACTAAGCAGGGTTTTGTTCCTTCAAAGAACTGACAGCAGTTGGAAGAAGAGTAGTTCGCGATATATTATGACATCTTATTTTCAGCCATTGTTGTTATGGATTGGGGCAATGCTCATATGCAGGGCATTAGATCCAATTGTCCTACCATCTAAGTCCAGCCAGGTTGTGAAGCAGCGGCTTCTGAGTTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGTTTAATTCAACAAGCACAAAAATTCTTTGTGGAGGCAAATGACTCCAGTGGTTCAAGAAATGTGGGCTTTGATTTGGCTGGGAAGGCAGTATATGCTGCTGTTTGGGTTGCTGCCGTGTCATTGTTCATGGAGCTGTTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTTACTCTGGCCGGTCGCGAGATATTTACAAACTTTCTGTCAAGCATAATGATCCATGCCACTCGGCCATTTATTGTGAACGAGTGGATTCAAACGAAAATTGAAGGATACGAGGTTTCTGGCACAGTAGAGCATGTAGGATGGTGGTCACCAACCATTGTTAGAGGCGATGACCGTGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATATTGTGAGAAATCTGACCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCAAAAAATCCTCAAGTAGAGCAGCAAAAATTGCACAGAAGGGTCTTTTTGGAGAATGTTAATCTTGAAAATCAGGCTCTCATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGCGCCAGGCTAGCCACTCCCATCCGCACAGTTCAGAAAACATACGGTGAGGCTGACTCGGAAAATATACCTTTTGAGGACTCGATTTTCACCAGATCTAGAGCTGCAAATCGTCCATTCCTACTGATAGAACCACCATATAAAGTTCATGGTGAAGATAAAGTTAAACCCTCAACCCGTGCAGCTCGCGCAAATGAGGAAAAAGATTCCAGGATTGATGAAATCACGGCATCTGACACCAAAGGGGATGAGAATTCTGGAGCAACATCTACTTCGTCAGCTGATGTAAACAACTCCAGGGATAAATCCAAGTCATTTTCCGAATCACAGACTAAAAGGGAAAATGCAGAAGATGAACGAAAGGGAAGTACCGTTCCTGTATCTAGAAATCTATCTCAAAGTAATGTGCTTGAATCCTCTCCGGTTGCTACCCATGAGACCATTTCGGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTCTTATCGGTTAGAACTTCCTTGGAAGAGAACATTCTTCTCGGGGTTGCCTTAGAAGGCTCAAAACGAACACTTCCTATCGAAGAAGAAATTACTCCATCTCCCATGCCCACCGATTCACAAGAATTTGCTGTTCAACGGAACGGTGGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTCCCAACTGATAAACAAAATGACTAG 1890 0.427 MSVCPNTGWREWNSSHEICWCYFNKVGFSLLVNLERFPKFSGYVCSYLSYDALQRNPVLLQLIPALGIIAFAACGLEPLIRLSRVLFLQRTDSSWKKSSSRYIMTSYFQPLLLWIGAMLICRALDPIVLPSKSSQVVKQRLLSFVRSLSTVISFAYCLSSLIQQAQKFFVEANDSSGSRNVGFDLAGKAVYAAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNIVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNLENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKTYGEADSENIPFEDSIFTRSRAANRPFLLIEPPYKVHGEDKVKPSTRAARANEEKDSRIDEITASDTKGDENSGATSTSSADVNNSRDKSKSFSESQTKRENAEDERKGSTVPVSRNLSQSNVLESSPVATHETISATSSQSKQDEEKSSVLSVRTSLEENILLGVALEGSKRTLPIEEEITPSPMPTDSQEFAVQRNGGGPPASKDKKDGQSSFPTDKQND 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02668 629 Pfam Mechanosensitive ion channel 188 395 IPR006685 GO:0016020|GO:0055085
Viun9g02668 629 MobiDBLite consensus disorder prediction 495 518 - -
Viun9g02668 629 MobiDBLite consensus disorder prediction 475 494 - -
Viun9g02668 629 MobiDBLite consensus disorder prediction 445 474 - -
Viun9g02668 629 MobiDBLite consensus disorder prediction 445 629 - -
Viun9g02668 629 MobiDBLite consensus disorder prediction 519 554 - -
Viun9g02668 629 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 48 620 IPR045042 -
Viun9g02668 629 Gene3D - 246 299 IPR023408 -
Viun9g02668 629 Gene3D - 144 245 - -
Viun9g02668 629 SUPERFAMILY Sm-like ribonucleoproteins 231 301 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02668 Viun-Chr9 35581929 35587903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02668 49 620 Mechanosensitive Ion Channel Family AT5G10490 60.309 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02668 K22047 - gmx:100796022 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02668 9 35581929 35587903 Viun9g02668 9 35581929 35587903 ECH