Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02667 ATGGTCTGTCCAGGTTCAACGCAACTGTCTCATGACGTTAGGCTCAACAGTAATATTGGATTCTGCGGTTTTCATCGTCATAATCGGATGGGGGTTGGTCGATTACATTTGGTCACCATAAATCTTTCACCGGGTAGCTTGAAACAAGACTCTTCGACACTCCATCTTTTAAGTAGACTACATGCTCCAATAAGGCACGTGCCTTCCAAATGTAATGTTTTCATATGTCGGTCTGTCCTAACACCGGGTGGAGGGAGTGGAACTCCTCTCATGAAATCTGCTGGTGTTATTTTAACAAGGTCATATGATGCTTTACAAAGGAACCCTGTTTTGCTTCAATTGATCCCAGCCCTTGGCATCATTGCCTTTGCTGCTTGCGGTCTTGAGCCACTCATTCGACTAAGCAGGGTTTTGTTCCTTCAAAGAACTGACAGCAGTTGGAAGAAGAGTAGTTCGCGATATATTATGACATCTTATTTTCAGCCATTGTTGTTATGGATTGGGGCAATGCTCATATGCAGGGCATTAGATCCAATTGTCCTACCATCTAAGTCCAGCCAGGTTGTGAAGCAGCGGCTTCTGAGTTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGTTTAATTCAACAAGCACAAAAATTCTTTGTGGAGGCAAATGACTCCAGTGGTTCAAGAAATGTGGGCTTTGATTTGGCTGGGAAGGCAGTATATGCTGCTGTTTGGGTTGCTGCCGTGTCATTGTTCATGGAGCTGTTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTTACTCTGGCCGGTCGCGAGATATTTACAAACTTTCTGTCAAGCATAATGATCCATGCCACTCGGCCATTTATTGTGAACGAGTGGATTCAAACGAAAATTGAAGGATACGAGGTTTCTGGCACAGTAGAGCATGTAGGATGGTGGTCACCAACCATTGTTAGAGGCGATGACCGTGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATATTGTGAGAAATCTGACCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCAAAAAATCCTCAAGTAGAGCAGCAAAAATTGCACAGAAGGGTCTTTTTGGAGAATGTTAATCTTGAAAATCAGGCTCTCATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGCGCCAGGCTAGCCACTCCCATCCGCACAGTTCAGAAAACATACGGTGAGGCTGACTCGGAAAATATACCTTTTGAGGACTCGATTTTCACCAGATCTAGAGCTGCAAATCGTCCATTCCTACTGATAGAACCACCATATAAAGTTCATGGTGAAGATAAAGTTAAACCCTCAACCCGTGCAGCTCGCGCAAATGAGGAAAAAGATTCCAGGATTGATGAAATCACGGCATCTGACACCAAAGGGGATGAGAATTCTGGAGCAACATCTACTTCGTCAGCTGATGTAAACAACTCCAGGGATAAATCCAAGTCATTTTCCGAATCACAGACTAAAAGGGAAAATGCAGAAGATGAACGAAAGGGAAGTACCGTTCCTGTATCTAGAAATCTATCTCAAAGTAATGTGCTTGAATCCTCTCCGGTTGCTACCCATGAGACCATTTCGGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTCTTATCGGTTAGAACTTCCTTGGAAGAGAACATTCTTCTCGGGGTTGCCTTAGAAGGCTCAAAACGAACACTTCCTATCGAAGAAGAAATTACTCCATCTCCCATGCCCACCGATTCACAAGAATTTGCTGTTCAACGGAACGGTGGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTCCCAACTGATAAACAAAATGACTAG 2046 0.4282 MVCPGSTQLSHDVRLNSNIGFCGFHRHNRMGVGRLHLVTINLSPGSLKQDSSTLHLLSRLHAPIRHVPSKCNVFICRSVLTPGGGSGTPLMKSAGVILTRSYDALQRNPVLLQLIPALGIIAFAACGLEPLIRLSRVLFLQRTDSSWKKSSSRYIMTSYFQPLLLWIGAMLICRALDPIVLPSKSSQVVKQRLLSFVRSLSTVISFAYCLSSLIQQAQKFFVEANDSSGSRNVGFDLAGKAVYAAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNIVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNLENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKTYGEADSENIPFEDSIFTRSRAANRPFLLIEPPYKVHGEDKVKPSTRAARANEEKDSRIDEITASDTKGDENSGATSTSSADVNNSRDKSKSFSESQTKRENAEDERKGSTVPVSRNLSQSNVLESSPVATHETISATSSQSKQDEEKSSVLSVRTSLEENILLGVALEGSKRTLPIEEEITPSPMPTDSQEFAVQRNGGGPPASKDKKDGQSSFPTDKQND 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02667 681 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Viun9g02667 681 MobiDBLite consensus disorder prediction 547 570 - -
Viun9g02667 681 MobiDBLite consensus disorder prediction 497 526 - -
Viun9g02667 681 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 672 IPR045042 -
Viun9g02667 681 MobiDBLite consensus disorder prediction 497 681 - -
Viun9g02667 681 Gene3D - 193 297 - -
Viun9g02667 681 MobiDBLite consensus disorder prediction 527 546 - -
Viun9g02667 681 MobiDBLite consensus disorder prediction 571 606 - -
Viun9g02667 681 Gene3D - 298 351 IPR023408 -
Viun9g02667 681 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02667 Viun-Chr9 35581349 35587903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02667 9 654 Mechanosensitive Ion Channel Family AT1G58200 56.296 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02667 K22047 - gmx:100777815 1151.73