Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02659 ATGTCGGAGAAGAAGACCAAAGTGTCTTTTACAGAAAAAGATGCTGTGGCGCTGATGCAAAGGTACGACCCAACTACAGTGTTCACTCTACTTCAAGAAGTTGCGCATTACGCTAAGCCAAAGATTGATTGGAGCGAGTTGGTGAAGAAAAGCGCAACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTATCGGCATTCTTTGTCGGAAAATTTTGAAGTTGGGGCTGAACCTCTGGATGATGACAGTGACTTGGAGTGTGAGCTAGAAGCATTACCTCCTGTTAGTGTGGAATCTGCATCAGAGGCGGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTCAGTGACTCTGCCCCTAGTAGCTCAACAATCGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTAGAACTCTTATTGAAAGTTCACAACCCTCTAATTTGATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACGCACCCTGTACCACCAACAGATGGTATCGAATCTAAGGGGTTAGTTGGTGGTAATTTGGCGTCCAAAAGAAAACGGAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTTCAGAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCTACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAGAAAGATGGCACTGTCAATTCTGGAACCATATCAACCAGCACACAATATACTGCTGCTGAACAACTGGCAACCCGACACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGATTGTCAGATCCTGCTAAGACATCCACATCAGTTAAAAATCAAGTGCAGATTAGAAATACTGTGGAGAAGGTTGCCAGTAGTTTCGTACCACCTCAACAGCCATCTCAGCAAGCTTCTTTGTTGGGATCTGATTCTCATGTAAAACCTAAATTAGTAGATGAAAAACTAGTCTCCAAGGGTAACATAATTTCAAATCCTGTGCTAAAATCTACCACAGCTGCTCCTGGGACAAGAATTGATTCACCTTCAACAAATACTGTATCACAGTTAAAAATTGCTCCAGTAAAACACAACATAGACACTAAGCCTGCAGTGAGCTCTTTGACAAGAACATCCGTTTCAACCAATTTGCCTTCTGACCCAAAGAACAAACCGGTTACACCTTTAGCTGCTGGTAAAGTTCCATCGGAGCAAGATGCTAATTCCACGAAAGAGTTTAGAGCTTCCGATCCCAGTTCCAGACCGAAAGATCAGACACAAGAAAATGAACCTCCTAAAGTTACTATTGGAAGCCAGGTCAATAACGACTTAGAGAAGGGAAGATTAGATATAGGTCAAGCGAAGATCGTGCCTATTAGTAATGGAGAGGAAACTTTGAAAGATAAAGCAAATCCAGTCGCAGATGAAAAACAACCAAGTGCTACTAAAGCAAATGCAGTGGTGTGCGAAGACCAAGGAAGTGTTAAGAATGCTACTGAGAATAGCAACCTTGACAAGGGAAGCTTAAATTCTAATCAAGACAAGAAGAAAACTTCAATTAATGAAAGTTCAAACAATCAAAACATGAATGACAAAAATGTAAATTTGCCCGTACAAGATGAAGGCAGCCAAAGTGCCAAGGTGGTAAAAACTGATGGAGAACGTTGA 1752 0.4218 MSEKKTKVSFTEKDAVALMQRYDPTTVFTLLQEVAHYAKPKIDWSELVKKSATGISNVREYQMLWRHLAYRHSLSENFEVGAEPLDDDSDLECELEALPPVSVESASEAAACVKVMIASRTLSDSAPSSSTIEAPLTINVPVCHSSRTLIESSQPSNLMQGTNIVFPVTVQRQTLPTHPVPPTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTAAEQLATRHSLSLALDMPFKKLTAPGLSDPAKTSTSVKNQVQIRNTVEKVASSFVPPQQPSQQASLLGSDSHVKPKLVDEKLVSKGNIISNPVLKSTTAAPGTRIDSPSTNTVSQLKIAPVKHNIDTKPAVSSLTRTSVSTNLPSDPKNKPVTPLAAGKVPSEQDANSTKEFRASDPSSRPKDQTQENEPPKVTIGSQVNNDLEKGRLDIGQAKIVPISNGEETLKDKANPVADEKQPSATKANAVVCEDQGSVKNATENSNLDKGSLNSNQDKKKTSINESSNNQNMNDKNVNLPVQDEGSQSAKVVKTDGER 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02659 583 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Viun9g02659 583 MobiDBLite consensus disorder prediction 321 341 - -
Viun9g02659 583 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
Viun9g02659 583 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Viun9g02659 583 SMART sant 201 253 IPR001005 -
Viun9g02659 583 MobiDBLite consensus disorder prediction 520 574 - -
Viun9g02659 583 MobiDBLite consensus disorder prediction 321 338 - -
Viun9g02659 583 MobiDBLite consensus disorder prediction 398 583 - -
Viun9g02659 583 CDD SANT_TRF 203 252 - -
Viun9g02659 583 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 568 - -
Viun9g02659 583 Gene3D - 196 256 - -
Viun9g02659 583 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Viun9g02659 583 MobiDBLite consensus disorder prediction 398 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02659 Viun-Chr9 35533104 35542326 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g02659 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02659 - - gmx:100805773 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02659 9 35533104 35542326 Viun9g02659 9 35533104 35542326 ECH
Viun8g01612 8 27064992 27069226 Viun9g02659 9 35533104 35542326 PCT